Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 UBE2V1P9-201ENST00000414760 368 ntBASIC5.8□□□□□ -1.48
COPAP53621 Z93019.1-201ENST00000416450 973 ntBASIC5.8□□□□□ -1.48
COPAP53621 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AL355433.1-201ENST00000422804 300 ntBASIC5.8□□□□□ -1.48
COPAP53621 MTCO2P23-201ENST00000425216 680 ntBASIC5.8□□□□□ -1.48
COPAP53621 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COPAP53621 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.8□□□□□ -1.48
COPAP53621 NPM1P18-201ENST00000434232 732 ntBASIC5.8□□□□□ -1.48
COPAP53621 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.8□□□□□ -1.48
COPAP53621 MED6P1-201ENST00000439659 713 ntBASIC5.8□□□□□ -1.48
COPAP53621 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 MED28P3-201ENST00000444288 531 ntBASIC5.8□□□□□ -1.48
COPAP53621 MYO5BP2-201ENST00000449815 1277 ntBASIC5.8□□□□□ -1.48
COPAP53621 AL591363.1-201ENST00000450091 483 ntBASIC5.8□□□□□ -1.48
COPAP53621 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AC026348.1-201ENST00000462549 1053 ntBASIC5.8□□□□□ -1.48
COPAP53621 AL133445.1-201ENST00000467051 452 ntBASIC5.8□□□□□ -1.48
COPAP53621 AC020779.1-201ENST00000478757 796 ntBASIC5.8□□□□□ -1.48
COPAP53621 HMGB1P38-201ENST00000490557 577 ntBASIC5.8□□□□□ -1.48
COPAP53621 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 AC114322.1-201ENST00000506771 926 ntBASIC5.8□□□□□ -1.48
COPAP53621 SNORA31.13-201ENST00000516624 135 ntBASIC5.8□□□□□ -1.48
COPAP53621 AC078899.1-201ENST00000521432 1185 ntBASIC5.8□□□□□ -1.48
COPAP53621 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 AC013701.1-201ENST00000522657 465 ntBASIC5.8□□□□□ -1.48
COPAP53621 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.8□□□□□ -1.48
COPAP53621 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 SUMO2P15-201ENST00000604285 278 ntBASIC5.8□□□□□ -1.48
COPAP53621 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.8□□□□□ -1.48
COPAP53621 MIR6719-201ENST00000622428 87 ntBASIC5.8□□□□□ -1.48
COPAP53621 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.8□□□□□ -1.48
COPAP53621 AL390318.1-201ENST00000624564 687 ntBASIC5.8□□□□□ -1.48
COPAP53621 AL109659.3-201ENST00000624985 950 ntBASIC5.8□□□□□ -1.48
COPAP53621 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
COPAP53621 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.8□□□□□ -1.48
COPAP53621 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 HSPA8P17-201ENST00000427029 1382 ntBASIC5.8□□□□□ -1.48
COPAP53621 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPAP53621 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 MFSD8-213ENST00000641134 1327 ntBASIC5.79□□□□□ -1.48
COPAP53621 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COPAP53621 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COPAP53621 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COPAP53621 RNU5B-4P-201ENST00000363508 111 ntBASIC5.79□□□□□ -1.48
COPAP53621 SNORD56.4-201ENST00000363883 71 ntBASIC5.79□□□□□ -1.48
COPAP53621 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 SNORA5.1-201ENST00000384275 131 ntBASIC5.79□□□□□ -1.48
COPAP53621 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.79□□□□□ -1.48
COPAP53621 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 AL035458.1-201ENST00000433096 585 ntBASIC5.79□□□□□ -1.48
COPAP53621 SPRYD7P1-201ENST00000443861 570 ntBASIC5.79□□□□□ -1.48
COPAP53621 AL163193.1-201ENST00000444895 788 ntBASIC5.79□□□□□ -1.48
COPAP53621 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.79□□□□□ -1.48
COPAP53621 RPL7P61-201ENST00000451721 751 ntBASIC5.79□□□□□ -1.48
COPAP53621 AC011225.1-201ENST00000457751 369 ntBASIC5.79□□□□□ -1.48
COPAP53621 AC021205.1-201ENST00000468797 348 ntBASIC5.79□□□□□ -1.48
COPAP53621 RPL35AP19-201ENST00000469425 329 ntBASIC5.79□□□□□ -1.48
COPAP53621 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.79□□□□□ -1.48
COPAP53621 AC087672.1-201ENST00000479876 766 ntBASIC5.79□□□□□ -1.48
COPAP53621 RN7SL570P-201ENST00000484405 292 ntBASIC5.79□□□□□ -1.48
COPAP53621 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 AC073610.1-201ENST00000489971 396 ntBASIC5.79□□□□□ -1.48
COPAP53621 AC098862.1-201ENST00000504991 413 ntBASIC5.79□□□□□ -1.48
COPAP53621 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
COPAP53621 AL671862.1-201ENST00000515851 349 ntBASIC5.79□□□□□ -1.48
COPAP53621 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 NRBF2P4-201ENST00000520874 850 ntBASIC5.79□□□□□ -1.48
COPAP53621 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.79□□□□□ -1.48
COPAP53621 AC090424.1-201ENST00000535243 736 ntBASIC5.79□□□□□ -1.48
COPAP53621 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.79□□□□□ -1.48
COPAP53621 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.79□□□□□ -1.48
COPAP53621 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.79□□□□□ -1.48
COPAP53621 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.79□□□□□ -1.48
COPAP53621 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.79□□□□□ -1.48
COPAP53621 BNIP3P38-201ENST00000601117 544 ntBASIC5.79□□□□□ -1.48
COPAP53621 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.79□□□□□ -1.48
COPAP53621 AC112220.2-201ENST00000605513 533 ntBASIC5.79□□□□□ -1.48
COPAP53621 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.79□□□□□ -1.48
COPAP53621 SDR42E1P1-201ENST00000611327 477 ntBASIC5.79□□□□□ -1.48
COPAP53621 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms