Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.81□□□□□ -1.32
MSH6P52701 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
MSH6P52701 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 AC017079.1-201ENST00000333650 415 ntBASIC6.81□□□□□ -1.32
MSH6P52701 RNA5SP223-201ENST00000365174 120 ntBASIC6.81□□□□□ -1.32
MSH6P52701 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.81□□□□□ -1.32
MSH6P52701 RNA5SP171-201ENST00000391071 115 ntBASIC6.81□□□□□ -1.32
MSH6P52701 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.81□□□□□ -1.32
MSH6P52701 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.81□□□□□ -1.32
MSH6P52701 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 BUD31P1-201ENST00000521828 359 ntBASIC6.81□□□□□ -1.32
MSH6P52701 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.81□□□□□ -1.32
MSH6P52701 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.81□□□□□ -1.32
MSH6P52701 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
MSH6P52701 AC069061.3-201ENST00000582254 823 ntBASIC6.81□□□□□ -1.32
MSH6P52701 MIR3138-201ENST00000585238 82 ntBASIC6.81□□□□□ -1.32
MSH6P52701 AC100847.1-201ENST00000611316 481 ntBASIC6.81□□□□□ -1.32
MSH6P52701 AL035461.2-201ENST00000619201 524 ntBASIC6.81□□□□□ -1.32
MSH6P52701 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.8□□□□□ -1.32
MSH6P52701 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.8□□□□□ -1.32
MSH6P52701 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MSH6P52701 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
MSH6P52701 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 RPL23AP24-201ENST00000458203 385 ntBASIC6.8□□□□□ -1.32
MSH6P52701 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 SAP18P1-201ENST00000512058 390 ntBASIC6.8□□□□□ -1.32
MSH6P52701 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 AC015795.1-201ENST00000513669 327 ntBASIC6.8□□□□□ -1.32
MSH6P52701 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MSH6P52701 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.8□□□□□ -1.32
MSH6P52701 MIR7853-201ENST00000584820 132 ntBASIC6.8□□□□□ -1.32
MSH6P52701 AC087821.1-201ENST00000623639 567 ntBASIC6.8□□□□□ -1.32
MSH6P52701 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.79□□□□□ -1.32
MSH6P52701 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.79□□□□□ -1.32
MSH6P52701 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MSH6P52701 AC017019.1-201ENST00000426129 261 ntBASIC6.79□□□□□ -1.32
MSH6P52701 TRGV7-201ENST00000427089 353 ntBASIC6.79□□□□□ -1.32
MSH6P52701 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 FHP1-201ENST00000442741 703 ntBASIC6.79□□□□□ -1.32
MSH6P52701 AC104971.1-201ENST00000495117 578 ntBASIC6.79□□□□□ -1.32
MSH6P52701 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.79□□□□□ -1.32
MSH6P52701 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.79□□□□□ -1.32
MSH6P52701 AC084783.1-201ENST00000565846 910 ntBASIC6.79□□□□□ -1.32
MSH6P52701 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
MSH6P52701 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.79□□□□□ -1.32
MSH6P52701 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.79□□□□□ -1.32
MSH6P52701 AC017104.4-201ENST00000636283 1592 ntBASIC6.79□□□□□ -1.32
MSH6P52701 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MSH6P52701 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.78□□□□□ -1.32
MSH6P52701 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
MSH6P52701 SAMMSON-210ENST00000641260 1308 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.78□□□□□ -1.32
MSH6P52701 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.78□□□□□ -1.32
MSH6P52701 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 RNA5SP453-201ENST00000362503 119 ntBASIC6.78□□□□□ -1.32
MSH6P52701 RN7SKP224-201ENST00000364140 325 ntBASIC6.78□□□□□ -1.32
MSH6P52701 SNORA11C-201ENST00000408532 129 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 TBCAP2-201ENST00000416175 326 ntBASIC6.78□□□□□ -1.32
MSH6P52701 RPS12P10-201ENST00000427031 377 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AL359265.1-201ENST00000440296 795 ntBASIC6.78□□□□□ -1.32
MSH6P52701 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 AC114755.5-201ENST00000447760 831 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.78□□□□□ -1.32
MSH6P52701 AP002812.1-201ENST00000495378 474 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MSH6P52701 AC011477.5-201ENST00000586571 259 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AC022726.1-201ENST00000587475 207 ntBASIC6.78□□□□□ -1.32
MSH6P52701 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.78□□□□□ -1.32
MSH6P52701 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms