Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR6823-201ENST00000622118 61 ntBASIC5□□□□□ -1.61
SOX2P48431 AC109454.4-201ENST00000623411 649 ntBASIC5□□□□□ -1.61
SOX2P48431 AC017037.3-201ENST00000625016 472 ntBASIC5□□□□□ -1.61
SOX2P48431 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 OR8A1-204ENST00000642111 1145 ntBASIC5□□□□□ -1.61
SOX2P48431 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SOX2P48431 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 RNU6-1214P-201ENST00000363650 109 ntBASIC4.99□□□□□ -1.61
SOX2P48431 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SOX2P48431 AL034374.1-201ENST00000406329 351 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC013404.1-201ENST00000413068 249 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL035422.1-201ENST00000414193 397 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 TMEM183AP1-205ENST00000432739 290 ntBASIC4.99□□□□□ -1.61
SOX2P48431 MTCO1P52-201ENST00000433928 531 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 MTND2P14-201ENST00000482139 351 ntBASIC4.99□□□□□ -1.61
SOX2P48431 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 RPS27P20-201ENST00000492051 246 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC010486.2-201ENST00000505572 483 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC010486.3-201ENST00000511602 785 ntBASIC4.99□□□□□ -1.61
SOX2P48431 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AC113191.1-201ENST00000517759 403 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 AC025260.1-201ENST00000548858 430 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC125611.1-201ENST00000549563 229 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.99□□□□□ -1.61
SOX2P48431 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 AC090695.1-201ENST00000561269 1222 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 AP005119.1-201ENST00000580956 292 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX2P48431 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.99□□□□□ -1.61
SOX2P48431 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 AC068768.2-201ENST00000602352 343 ntBASIC4.99□□□□□ -1.61
SOX2P48431 MTND3P19-201ENST00000603825 345 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC069304.3-201ENST00000603938 1084 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 TUSC7.1-201ENST00000610969 165 ntBASIC4.99□□□□□ -1.61
SOX2P48431 AL121594.5-201ENST00000631724 573 ntBASIC4.99□□□□□ -1.61
SOX2P48431 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 LINC02211-204ENST00000642024 1070 ntBASIC4.99□□□□□ -1.61
SOX2P48431 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 AC111188.2-201ENST00000529697 1387 ntBASIC4.99□□□□□ -1.61
SOX2P48431 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SOX2P48431 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SOX2P48431 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX2P48431 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 AL121886.1-201ENST00000358609 435 ntBASIC4.98□□□□□ -1.61
SOX2P48431 RNU6-353P-201ENST00000364266 108 ntBASIC4.98□□□□□ -1.61
SOX2P48431 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 RNU6-185P-201ENST00000384421 107 ntBASIC4.98□□□□□ -1.61
SOX2P48431 MIR130A-201ENST00000385274 89 ntBASIC4.98□□□□□ -1.61
SOX2P48431 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SOX2P48431 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SOX2P48431 AC005042.1-201ENST00000393397 800 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AL008987.1-201ENST00000415528 237 ntBASIC4.98□□□□□ -1.61
SOX2P48431 Z75741.2-201ENST00000417272 1167 ntBASIC4.98□□□□□ -1.61
SOX2P48431 THEM7P-201ENST00000419556 672 ntBASIC4.98□□□□□ -1.61
SOX2P48431 MTND2P18-201ENST00000419962 1030 ntBASIC4.98□□□□□ -1.61
SOX2P48431 OR6K4P-201ENST00000423179 955 ntBASIC4.98□□□□□ -1.61
SOX2P48431 VTI1BP4-201ENST00000427516 527 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC108479.1-201ENST00000431142 427 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms