Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC023141.6-201ENST00000429418 337 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 AL136455.1-201ENST00000441083 1240 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC010618.1-201ENST00000469924 477 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL12P48061 BUD31P1-201ENST00000521828 359 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CXCL12P48061 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 NDUFB4P11-201ENST00000560510 395 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL12P48061 AC022726.1-201ENST00000587475 207 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 AL049794.2-201ENST00000616301 365 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 AC243960.7-201ENST00000623532 707 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 AP001153.1-201ENST00000641024 338 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL12P48061 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 AC120338.1-201ENST00000625074 1541 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CXCL12P48061 AL592148.3-201ENST00000608771 2646 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL12P48061 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL12P48061 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL12P48061 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.9□□□□□ -1.62
CXCL12P48061 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.9□□□□□ -1.62
CXCL12P48061 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CXCL12P48061 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL12P48061 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL12P48061 RN7SKP185-201ENST00000362813 326 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 U3.30-201ENST00000391308 210 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 TBCAP2-201ENST00000416175 326 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL12P48061 REREP1Y-201ENST00000422655 198 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 FABP7P1-201ENST00000424004 391 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 RPL7AP49-201ENST00000429522 581 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 AL591438.1-201ENST00000433508 581 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 RPL19P16-201ENST00000433839 588 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 REREP2Y-201ENST00000439103 200 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 H3F3BP1-201ENST00000440551 403 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 LDHBP3-201ENST00000514909 822 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 RNA5SP392-201ENST00000516905 112 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL12P48061 AC133555.2-201ENST00000550213 292 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 AL109766.1-201ENST00000555080 552 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL12P48061 MIR3160-1-201ENST00000577972 85 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 KPNA2P3-201ENST00000584190 848 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL12P48061 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL12P48061 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL12P48061 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL12P48061 AP002512.4-202ENST00000641599 4530 ntBASIC4.9□□□□□ -1.63
CXCL12P48061 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL12P48061 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
CXCL12P48061 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL12P48061 AC025574.1-201ENST00000554784 1653 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CXCL12P48061 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL12P48061 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 RNA5SP397-201ENST00000391323 118 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 GAPDHP49-201ENST00000421421 961 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 NPM1P33-201ENST00000438918 872 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL12P48061 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL12P48061 AC104971.1-201ENST00000495117 578 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 RNU2-30P-201ENST00000516209 141 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 AC138701.1-201ENST00000524329 714 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 OR8Q1P-201ENST00000526467 655 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL12P48061 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 AC023575.1-201ENST00000580510 358 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AC069061.3-201ENST00000582254 823 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AL109618.2-201ENST00000605527 211 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 AC010857.1-201ENST00000606398 594 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms