Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 THAP12P5-201ENST00000405864 2275 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
NKX2-1P43699 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AL159987.1-201ENST00000347911 293 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.46□□□□□ -1.7
NKX2-1P43699 HMGB3P19-201ENST00000403971 560 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC211486.3-201ENST00000412694 621 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 NPM1P40-201ENST00000412758 733 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC073310.1-201ENST00000423226 1033 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC013262.1-201ENST00000426710 252 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 RPS24P8-201ENST00000431490 402 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 CYCSP24-201ENST00000445119 316 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 CASP3P1-201ENST00000446037 609 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 HMGB1P4-201ENST00000455362 567 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 RPL7AP10-201ENST00000481016 791 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 RPS27AP16-201ENST00000492222 470 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 RPS24P16-201ENST00000497294 392 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 OR5H3P-201ENST00000502817 919 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 RNU6-415P-201ENST00000516252 97 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 SCARNA6.1-201ENST00000516989 238 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AP000916.1-201ENST00000533869 835 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC084121.1-201ENST00000533882 835 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.46□□□□□ -1.7
NKX2-1P43699 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AGGF1P9-201ENST00000561884 913 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 MIR4502-201ENST00000580432 81 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC006272.2-201ENST00000594725 163 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC096947.1-201ENST00000603233 470 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC026741.1-201ENST00000605892 482 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC023813.4-201ENST00000607580 580 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC245100.7-201ENST00000609678 442 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AP005229.2-201ENST00000609980 697 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AP003476.1-201ENST00000623984 516 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC111152.1-202ENST00000635848 339 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 AP000542.2-201ENST00000623199 6179 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 AC114947.2-201ENST00000565748 2125 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-1P43699 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-1P43699 MTCO1P18-201ENST00000455518 1419 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 STX3-208ENST00000641815 3236 ntBASIC4.46□□□□□ -1.7
NKX2-1P43699 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NKX2-1P43699 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-1P43699 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC096656.1-201ENST00000623826 1364 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 HSPA8P14-201ENST00000552265 1805 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-1P43699 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-1P43699 RNU1-19P-201ENST00000363306 165 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 RNA5SP30-201ENST00000365552 115 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 MIR142-201ENST00000384835 87 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 GCNT1P4-201ENST00000404096 329 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 MRPL53P1-201ENST00000414323 319 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 UBE2V1P9-201ENST00000414760 368 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC007161.1-204ENST00000423039 460 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC126120.1-201ENST00000431082 470 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms