Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 AC015922.4-201ENST00000612568 690 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC006213.5-201ENST00000619673 288 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC074276.2-201ENST00000619891 348 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AL133370.2-201ENST00000619934 439 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXA13P31271 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 AL356317.1-201ENST00000396110 1436 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.71□□□□□ -1.49
HOXA13P31271 AC112198.2-201ENST00000426589 6996 ntBASIC5.71□□□□□ -1.49
HOXA13P31271 SAMM50P1-201ENST00000455403 1399 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA13P31271 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXA13P31271 RN7SKP149-201ENST00000363008 344 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 AL672167.2-201ENST00000377164 879 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 ATP5HP3-201ENST00000396994 486 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 Z97832.1-201ENST00000402490 328 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 HYALP1-201ENST00000417674 1279 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 MTND2P11-201ENST00000423638 648 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA13P31271 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 COX6CP13-201ENST00000428703 226 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXA13P31271 MTCO3P43-201ENST00000440974 771 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 GAPDHP14-201ENST00000450472 937 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 HMGB1P4-201ENST00000455362 567 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC092324.1-201ENST00000468671 324 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 STRADBP1-201ENST00000478954 1281 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA13P31271 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXA13P31271 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA13P31271 AC016559.2-201ENST00000510759 359 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC098976.1-201ENST00000513014 541 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 OR7H2P-201ENST00000513483 306 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA13P31271 PCNPP1-201ENST00000552501 511 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 PRPF19P1-201ENST00000584766 898 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXA13P31271 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA13P31271 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA13P31271 AC005084.1-201ENST00000605160 304 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 AC020923.1-201ENST00000624021 917 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXA13P31271 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA13P31271 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXA13P31271 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HOXA13P31271 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA13P31271 AC109446.4-201ENST00000623235 2755 ntBASIC5.71□□□□□ -1.5
HOXA13P31271 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA13P31271 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC011503.2-201ENST00000594230 1500 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC010132.2-201ENST00000295493 1043 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXA13P31271 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 AL035419.1-201ENST00000397037 564 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 GAPDHP15-201ENST00000398586 975 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 ADAM24P-201ENST00000398655 2101 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 SNRPFP2-201ENST00000440710 251 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 RPL7AP61-201ENST00000443410 636 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC090543.1-201ENST00000492168 485 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC092868.3-201ENST00000560515 784 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXA13P31271 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA13P31271 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms