Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP1P30622 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CLIP1P30622 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
CLIP1P30622 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP1P30622 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
CLIP1P30622 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CLIP1P30622 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP1P30622 AL592148.3-201ENST00000608771 2646 ntBASIC7.6□□□□□ -1.19
CLIP1P30622 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CLIP1P30622 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.6□□□□□ -1.19
CLIP1P30622 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.6□□□□□ -1.19
CLIP1P30622 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP1P30622 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP1P30622 RBPJP2-201ENST00000618187 1444 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 RGS17P1-201ENST00000423358 553 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.59□□□□□ -1.19
CLIP1P30622 AK3P4-201ENST00000504283 583 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.59□□□□□ -1.19
CLIP1P30622 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP1P30622 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.59□□□□□ -1.19
CLIP1P30622 AC020910.2-201ENST00000603635 610 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 AC009704.2-201ENST00000618739 483 ntBASIC7.59□□□□□ -1.19
CLIP1P30622 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CLIP1P30622 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.59□□□□□ -1.19
CLIP1P30622 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.59□□□□□ -1.19
CLIP1P30622 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP1P30622 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CLIP1P30622 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP1P30622 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.58□□□□□ -1.2
CLIP1P30622 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.58□□□□□ -1.2
CLIP1P30622 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP1P30622 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP1P30622 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP1P30622 FAM3C2-201ENST00000312214 681 ntBASIC7.58□□□□□ -1.2
CLIP1P30622 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 RNA5SP397-201ENST00000391323 118 ntBASIC7.58□□□□□ -1.2
CLIP1P30622 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 STRADBP1-201ENST00000478954 1281 ntBASIC7.58□□□□□ -1.2
CLIP1P30622 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 RN7SKP92-201ENST00000517266 244 ntBASIC7.58□□□□□ -1.2
CLIP1P30622 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP1P30622 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP1P30622 AC016717.3-201ENST00000624730 554 ntBASIC7.58□□□□□ -1.2
CLIP1P30622 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.58□□□□□ -1.2
CLIP1P30622 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP1P30622 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP1P30622 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP1P30622 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CLIP1P30622 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.57□□□□□ -1.2
CLIP1P30622 AL451139.1-201ENST00000434718 346 ntBASIC7.57□□□□□ -1.2
CLIP1P30622 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.57□□□□□ -1.2
CLIP1P30622 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.57□□□□□ -1.2
CLIP1P30622 AC073358.1-201ENST00000505671 684 ntBASIC7.57□□□□□ -1.2
CLIP1P30622 RN7SKP122-201ENST00000515923 296 ntBASIC7.57□□□□□ -1.2
CLIP1P30622 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.57□□□□□ -1.2
CLIP1P30622 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CLIP1P30622 AC015914.2-201ENST00000618167 288 ntBASIC7.57□□□□□ -1.2
CLIP1P30622 AL359757.1-201ENST00000623176 255 ntBASIC7.57□□□□□ -1.2
CLIP1P30622 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CLIP1P30622 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CLIP1P30622 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP1P30622 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CLIP1P30622 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CLIP1P30622 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP1P30622 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP1P30622 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP1P30622 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP1P30622 RNA5SP187-201ENST00000384400 119 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 AC140479.3-201ENST00000418944 1126 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 RPL23AP1-201ENST00000428990 471 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP1P30622 AL161722.1-201ENST00000446972 1032 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 AL157385.1-201ENST00000446973 268 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 EIF2S2P2-201ENST00000447161 982 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP1P30622 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP1P30622 MIR4277-201ENST00000578298 84 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 AP005119.2-201ENST00000579735 1105 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.56□□□□□ -1.2
CLIP1P30622 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.56□□□□□ -1.2
CLIP1P30622 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP1P30622 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP1P30622 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms