Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 SSR1P2-201ENST00000415208 787 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 SLC35E1P1-201ENST00000419313 864 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC241520.1-201ENST00000422654 1099 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC093655.2-201ENST00000425735 631 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC092447.3-201ENST00000426027 686 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AL160175.1-201ENST00000428124 247 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 HMGB3P10-201ENST00000434734 572 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 RPS11P7-201ENST00000442125 465 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC044797.1-201ENST00000445744 679 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC092754.1-201ENST00000472975 479 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 COPS8P2-201ENST00000473228 627 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 CBX1P5-201ENST00000475330 559 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 PGAM1P13-201ENST00000507497 754 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMARCA1P28370 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC104229.1-201ENST00000561364 255 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 MIR4509-3-201ENST00000578671 94 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 CBX3P2-202ENST00000583365 535 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 MIR4509-2-201ENST00000583920 94 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC010487.1-201ENST00000594408 1172 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 Z95327.3-201ENST00000610385 572 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 RNU6-1192P-201ENST00000612197 107 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 MIR4509-1-201ENST00000618224 94 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 RNU6-489P-201ENST00000618289 107 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC015660.5-201ENST00000623238 564 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 AC136428.4-201ENST00000634254 1155 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMARCA1P28370 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMARCA1P28370 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMARCA1P28370 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMARCA1P28370 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
SMARCA1P28370 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.25□□□□□ -1.41
SMARCA1P28370 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.25□□□□□ -1.41
SMARCA1P28370 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA1P28370 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA1P28370 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA1P28370 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SMARCA1P28370 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 RNU6-468P-201ENST00000384003 109 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 RNU6-729P-201ENST00000384399 107 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AL034403.1-201ENST00000399414 885 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 RPL5P2-201ENST00000429598 854 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 RPL7L1P9-201ENST00000431298 745 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 MTCYBP29-201ENST00000436327 1006 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.24□□□□□ -1.41
SMARCA1P28370 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 OR2AO1P-201ENST00000476497 403 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 RPL7P39-201ENST00000481157 744 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 SCARNA21.2-201ENST00000516600 166 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC010376.1-201ENST00000522101 334 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AP004607.2-201ENST00000533949 322 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA1P28370 YWHABP2-201ENST00000540201 713 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AC090022.1-201ENST00000546569 311 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AL049779.2-201ENST00000553847 315 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC124283.4-201ENST00000581815 456 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 SNX6P1-201ENST00000601728 1224 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 OR7A19P-201ENST00000608051 733 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 MIR6133-201ENST00000617057 108 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA1P28370 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AP003400.3-201ENST00000624904 346 ntBASIC6.24□□□□□ -1.41
SMARCA1P28370 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SMARCA1P28370 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.24□□□□□ -1.41
SMARCA1P28370 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms