Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL121579.2-201ENST00000555466 590 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF4P23510 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFSF4P23510 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC026826.3-201ENST00000561747 158 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF4P23510 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC061975.8-201ENST00000587058 721 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 GAS5-AS1-201ENST00000602767 694 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 AC107952.2-201ENST00000606048 486 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFSF4P23510 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC021755.4-201ENST00000616620 456 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 AC015908.5-201ENST00000623289 343 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC111152.1-202ENST00000635848 339 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFSF4P23510 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF4P23510 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF4P23510 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFSF4P23510 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFSF4P23510 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TNFSF4P23510 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF4P23510 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF4P23510 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF4P23510 AC006511.3-201ENST00000624929 1783 ntBASIC5.27□□□□□ -1.57
TNFSF4P23510 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF4P23510 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC004656.1-201ENST00000568479 4951 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 RNU4-2-201ENST00000365668 141 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 RNU6-146P-201ENST00000384602 108 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 MIR1275-201ENST00000408770 80 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL450992.3-201ENST00000413192 568 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.26□□□□□ -1.57
TNFSF4P23510 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 RPL12P12-201ENST00000424633 501 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL354707.3-201ENST00000427308 331 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 RPL37P1-201ENST00000432310 284 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 NPM1P18-201ENST00000434232 732 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 GAPDHP23-201ENST00000444823 993 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 HMGB1P48-201ENST00000446155 598 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC103563.5-201ENST00000455643 364 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AL603882.1-201ENST00000463059 681 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 OR52A4P-201ENST00000472867 958 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 RN7SL165P-201ENST00000477476 291 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 UBA52P3-201ENST00000491303 382 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC018797.1-201ENST00000510791 255 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 RNU6-941P-201ENST00000516346 108 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC011853.1-201ENST00000518911 454 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AP001207.1-201ENST00000524051 481 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 OR4A2P-201ENST00000527276 913 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC084121.1-201ENST00000533882 835 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 MRPS21P8-201ENST00000569196 235 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC022662.1-201ENST00000580252 331 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC017100.2-201ENST00000584628 355 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 NPIPB1P-202ENST00000588786 828 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC091057.2-201ENST00000602594 792 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 RFPL4AP6-201ENST00000616792 846 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 AC073593.1-201ENST00000624500 411 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC003992.1-201ENST00000635364 557 ntBASIC5.26□□□□□ -1.57
TNFSF4P23510 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms