Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL450338.1-201ENST00000407987 512 ntBASIC7.48□□□□□ -1.21
RFX1P22670 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RFX1P22670 HMGN1P14-201ENST00000412459 517 ntBASIC7.48□□□□□ -1.21
RFX1P22670 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.48□□□□□ -1.21
RFX1P22670 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.48□□□□□ -1.21
RFX1P22670 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 AL031663.1-201ENST00000437445 219 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 PDSS1P2-201ENST00000449397 678 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AL445991.1-201ENST00000450381 475 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC099670.1-201ENST00000455141 783 ntBASIC7.48□□□□□ -1.21
RFX1P22670 GAPDHP53-201ENST00000458397 924 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 AC011352.2-201ENST00000514574 1016 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 NANOGNBP2-201ENST00000544753 553 ntBASIC7.48□□□□□ -1.21
RFX1P22670 OR6C73P-201ENST00000546432 358 ntBASIC7.48□□□□□ -1.21
RFX1P22670 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 CYCSP2-201ENST00000558168 301 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC015818.6-201ENST00000584274 634 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 AC112187.2-201ENST00000604345 283 ntBASIC7.48□□□□□ -1.21
RFX1P22670 TAS2R6P-201ENST00000605022 826 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC004067.1-201ENST00000608733 700 ntBASIC7.48□□□□□ -1.21
RFX1P22670 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AL080312.2-201ENST00000613001 630 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 AL359314.1-201ENST00000616913 261 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AL121890.2-201ENST00000617644 465 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.48□□□□□ -1.21
RFX1P22670 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RFX1P22670 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 CASC19-204ENST00000641001 2055 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC025125.1-201ENST00000624743 1922 ntBASIC7.48□□□□□ -1.21
RFX1P22670 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX1P22670 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX1P22670 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 RNU6-251P-201ENST00000363235 104 ntBASIC7.47□□□□□ -1.21
RFX1P22670 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RFX1P22670 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 Y_RNA.390-201ENST00000383932 102 ntBASIC7.47□□□□□ -1.21
RFX1P22670 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RFX1P22670 RPL17P50-201ENST00000396131 546 ntBASIC7.47□□□□□ -1.21
RFX1P22670 HSPD1P16-201ENST00000402302 394 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AC073264.1-201ENST00000411508 416 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 RPSAP60-201ENST00000415403 880 ntBASIC7.47□□□□□ -1.21
RFX1P22670 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX1P22670 MYL6P3-201ENST00000436904 432 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 AL354714.5-201ENST00000450131 590 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AC010878.1-201ENST00000456500 1047 ntBASIC7.47□□□□□ -1.21
RFX1P22670 RN7SL492P-201ENST00000460700 295 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AP003385.3-201ENST00000472498 287 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AC091544.1-201ENST00000484702 348 ntBASIC7.47□□□□□ -1.21
RFX1P22670 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.47□□□□□ -1.21
RFX1P22670 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 OR4A45P-201ENST00000529954 901 ntBASIC7.47□□□□□ -1.21
RFX1P22670 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 NXPE2P1-201ENST00000543705 726 ntBASIC7.47□□□□□ -1.21
RFX1P22670 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX1P22670 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 AC011500.1-201ENST00000601963 469 ntBASIC7.47□□□□□ -1.21
RFX1P22670 IMMP1LP1-201ENST00000605170 488 ntBASIC7.47□□□□□ -1.21
RFX1P22670 AC080013.4-201ENST00000607624 649 ntBASIC7.47□□□□□ -1.21
RFX1P22670 BX323046.1-201ENST00000610145 535 ntBASIC7.47□□□□□ -1.21
RFX1P22670 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 AL161420.1-201ENST00000619393 264 ntBASIC7.47□□□□□ -1.21
RFX1P22670 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX1P22670 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms