Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.37□□□□□ -1.71
USF1P22415 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USF1P22415 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 SMG1P7-201ENST00000565246 2704 ntBASIC4.37□□□□□ -1.71
USF1P22415 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.37□□□□□ -1.71
USF1P22415 RN7SKP104-201ENST00000362605 328 ntBASIC4.37□□□□□ -1.71
USF1P22415 OR8V1P-201ENST00000395193 873 ntBASIC4.37□□□□□ -1.71
USF1P22415 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.37□□□□□ -1.71
USF1P22415 COX6B1P1-201ENST00000415962 213 ntBASIC4.37□□□□□ -1.71
USF1P22415 OR13Z1P-201ENST00000416141 834 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AL360081.1-201ENST00000428299 555 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.37□□□□□ -1.71
USF1P22415 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 RPL19P16-201ENST00000433839 588 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC090018.1-201ENST00000434369 367 ntBASIC4.37□□□□□ -1.71
USF1P22415 RPS29P10-201ENST00000439197 166 ntBASIC4.37□□□□□ -1.71
USF1P22415 AL450263.2-201ENST00000439400 589 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 TRY2P-201ENST00000448860 689 ntBASIC4.37□□□□□ -1.71
USF1P22415 NDUFA5P8-201ENST00000449019 346 ntBASIC4.37□□□□□ -1.71
USF1P22415 AL591363.1-201ENST00000450091 483 ntBASIC4.37□□□□□ -1.71
USF1P22415 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.37□□□□□ -1.71
USF1P22415 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 GYG1P1-201ENST00000460864 698 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC006463.2-201ENST00000473326 348 ntBASIC4.37□□□□□ -1.71
USF1P22415 RN7SL860P-201ENST00000473738 223 ntBASIC4.37□□□□□ -1.71
USF1P22415 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC058823.1-201ENST00000485315 474 ntBASIC4.37□□□□□ -1.71
USF1P22415 AL049874.2-201ENST00000492636 288 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 HMGN1P9-201ENST00000515212 298 ntBASIC4.37□□□□□ -1.71
USF1P22415 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.37□□□□□ -1.71
USF1P22415 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 RN7SL290P-201ENST00000578661 300 ntBASIC4.37□□□□□ -1.71
USF1P22415 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.37□□□□□ -1.71
USF1P22415 AC108738.1-201ENST00000603703 237 ntBASIC4.37□□□□□ -1.71
USF1P22415 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.37□□□□□ -1.71
USF1P22415 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.37□□□□□ -1.71
USF1P22415 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.37□□□□□ -1.71
USF1P22415 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.37□□□□□ -1.71
USF1P22415 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USF1P22415 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF1P22415 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
USF1P22415 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USF1P22415 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USF1P22415 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USF1P22415 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
USF1P22415 AC021242.1-201ENST00000507315 2035 ntBASIC4.36□□□□□ -1.71
USF1P22415 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
USF1P22415 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
USF1P22415 U3.3-201ENST00000362986 216 ntBASIC4.36□□□□□ -1.71
USF1P22415 RNA5SP455-201ENST00000365190 119 ntBASIC4.36□□□□□ -1.71
USF1P22415 SNORA56-201ENST00000383966 129 ntBASIC4.36□□□□□ -1.71
USF1P22415 RNU6-1320P-201ENST00000390838 107 ntBASIC4.36□□□□□ -1.71
USF1P22415 RNU6-1269P-201ENST00000391139 107 ntBASIC4.36□□□□□ -1.71
USF1P22415 RPS4XP16-201ENST00000427198 791 ntBASIC4.36□□□□□ -1.71
USF1P22415 HSPD1P12-201ENST00000429127 1069 ntBASIC4.36□□□□□ -1.71
USF1P22415 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.36□□□□□ -1.71
USF1P22415 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.36□□□□□ -1.71
USF1P22415 PRPF38AP2-201ENST00000438179 851 ntBASIC4.36□□□□□ -1.71
USF1P22415 CEACAMP9-201ENST00000442990 513 ntBASIC4.36□□□□□ -1.71
USF1P22415 RNU6-599P-201ENST00000459383 107 ntBASIC4.36□□□□□ -1.71
USF1P22415 RNU6-1193P-201ENST00000459461 107 ntBASIC4.36□□□□□ -1.71
USF1P22415 AC105233.1-201ENST00000498840 781 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms