Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 ZNF90P1-201ENST00000480493 1951 ntBASIC5.28□□□□□ -1.56
PCNAP12004 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 RN7SKP28-201ENST00000364770 305 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU4-2-201ENST00000365668 141 ntBASIC5.28□□□□□ -1.56
PCNAP12004 MT-TP-201ENST00000387461 68 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-1320P-201ENST00000390838 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-1269P-201ENST00000391139 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 MIR1282-201ENST00000408865 101 ntBASIC5.28□□□□□ -1.56
PCNAP12004 BX664727.1-201ENST00000416024 466 ntBASIC5.28□□□□□ -1.56
PCNAP12004 OR51A6P-201ENST00000418680 1004 ntBASIC5.28□□□□□ -1.56
PCNAP12004 TNPO1P1-201ENST00000423641 1138 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.28□□□□□ -1.56
PCNAP12004 AL645638.1-201ENST00000440519 361 ntBASIC5.28□□□□□ -1.56
PCNAP12004 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 AC064862.4-201ENST00000442180 334 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AL450023.1-201ENST00000450868 751 ntBASIC5.28□□□□□ -1.56
PCNAP12004 TVP23BP2-201ENST00000455082 615 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-599P-201ENST00000459383 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-1193P-201ENST00000459461 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.28□□□□□ -1.56
PCNAP12004 PPM1AP1-201ENST00000502740 1135 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AC112518.2-201ENST00000508565 425 ntBASIC5.28□□□□□ -1.56
PCNAP12004 SEPT10P1-201ENST00000517342 1162 ntBASIC5.28□□□□□ -1.56
PCNAP12004 MTCYBP19-201ENST00000517463 1124 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.28□□□□□ -1.56
PCNAP12004 AC138701.1-201ENST00000524329 714 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.28□□□□□ -1.56
PCNAP12004 AC068020.1-201ENST00000594215 661 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AC245884.10-201ENST00000597355 337 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.28□□□□□ -1.56
PCNAP12004 AC012616.1-201ENST00000600294 197 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AC130352.1-201ENST00000602979 661 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AP001033.2-201ENST00000609701 1003 ntBASIC5.28□□□□□ -1.56
PCNAP12004 AL158062.1-201ENST00000619632 745 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-368P-201ENST00000620928 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 RNU6-538P-201ENST00000622329 107 ntBASIC5.28□□□□□ -1.56
PCNAP12004 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 AC008079.2-201ENST00000623543 20396 ntBASIC5.28□□□□□ -1.56
PCNAP12004 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCNAP12004 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AC006206.1-201ENST00000544842 3387 ntBASIC5.27□□□□□ -1.57
PCNAP12004 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 RN7SKP292-201ENST00000365522 317 ntBASIC5.27□□□□□ -1.57
PCNAP12004 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 RNA5SP122-201ENST00000384457 108 ntBASIC5.27□□□□□ -1.57
PCNAP12004 MIR122-201ENST00000385044 85 ntBASIC5.27□□□□□ -1.57
PCNAP12004 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AL024507.1-201ENST00000412741 274 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AL445183.3-201ENST00000414168 502 ntBASIC5.27□□□□□ -1.57
PCNAP12004 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.27□□□□□ -1.57
PCNAP12004 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AC002504.1-201ENST00000438281 691 ntBASIC5.27□□□□□ -1.57
PCNAP12004 TCEA1P3-201ENST00000443005 880 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AL157827.1-201ENST00000447622 132 ntBASIC5.27□□□□□ -1.57
PCNAP12004 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 NPM1P39-201ENST00000449818 867 ntBASIC5.27□□□□□ -1.57
PCNAP12004 RPL7P55-201ENST00000450522 746 ntBASIC5.27□□□□□ -1.57
PCNAP12004 OR52E7P-201ENST00000452394 933 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AP000942.1-201ENST00000463969 747 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms