Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 RNA5SP345-201ENST00000410646 108 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AL691482.1-201ENST00000453255 87 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AL513533.1-201ENST00000453728 415 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AC063943.1-201ENST00000465434 453 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AC116562.1-201ENST00000485355 781 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC4P09017 MIR3936-201ENST00000584304 110 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 AL512782.1-201ENST00000603093 364 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AC104687.2-201ENST00000604442 342 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AC010424.2-201ENST00000607594 443 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 AC007497.1-201ENST00000610421 561 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC4P09017 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 MTCO1P46-201ENST00000451639 1491 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
HOXC4P09017 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 SMG1P6-201ENST00000532337 2930 ntBASIC4.86□□□□□ -1.63
HOXC4P09017 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC4P09017 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC4P09017 DDX18P6-201ENST00000450119 1997 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 RNU6-249P-201ENST00000363016 102 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 RNU4-44P-201ENST00000363050 141 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXC4P09017 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXC4P09017 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXC4P09017 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC4P09017 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC4P09017 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC4P09017 CYCSP24-201ENST00000445119 316 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 RPS5P7-201ENST00000456664 608 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 AC007686.1-201ENST00000488511 463 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 AC011005.3-201ENST00000491624 395 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC4P09017 RNA5SP392-201ENST00000516905 112 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 MORF4L1P3-201ENST00000525966 950 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 AC063949.1-201ENST00000552900 865 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 AC006349.1-201ENST00000555526 235 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC4P09017 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC4P09017 AP000919.1-201ENST00000582850 985 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC4P09017 AC011453.2-201ENST00000603737 729 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 RNU6-84P-201ENST00000607737 102 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 AC019206.1-201ENST00000621938 425 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC4P09017 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC4P09017 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.85□□□□□ -1.63
HOXC4P09017 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC4P09017 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC4P09017 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC4P09017 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HOXC4P09017 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC4P09017 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC4P09017 PCAT14-202ENST00000627127 3935 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC4P09017 NAMPTP1-201ENST00000440465 2514 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC4P09017 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
HOXC4P09017 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
HOXC4P09017 SAMMSON-226ENST00000642089 1582 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 CASC19-255ENST00000641733 1385 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HOXC4P09017 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC4P09017 RPL21P67-201ENST00000402896 478 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 RPL10P10-201ENST00000403509 664 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 AL590139.1-201ENST00000416267 400 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 AC013268.2-201ENST00000420753 337 ntBASIC4.84□□□□□ -1.63
HOXC4P09017 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC4P09017 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC4P09017 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC4P09017 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms