Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC021422.1-201ENST00000621212 473 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.67□□□□□ -1.5
MMP3P08254 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.67□□□□□ -1.5
MMP3P08254 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.67□□□□□ -1.5
MMP3P08254 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MMP3P08254 RNU6-697P-201ENST00000363348 107 ntBASIC5.67□□□□□ -1.5
MMP3P08254 MIR192-201ENST00000384915 110 ntBASIC5.67□□□□□ -1.5
MMP3P08254 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MMP3P08254 AC013442.1-201ENST00000397347 228 ntBASIC5.67□□□□□ -1.5
MMP3P08254 RAB28P1-201ENST00000411517 641 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AC098592.2-201ENST00000413158 265 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.67□□□□□ -1.5
MMP3P08254 AC245028.1-201ENST00000423259 256 ntBASIC5.67□□□□□ -1.5
MMP3P08254 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 RNF19BPX-201ENST00000426224 625 ntBASIC5.67□□□□□ -1.5
MMP3P08254 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.67□□□□□ -1.5
MMP3P08254 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.67□□□□□ -1.5
MMP3P08254 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 AC099670.2-201ENST00000435130 321 ntBASIC5.67□□□□□ -1.5
MMP3P08254 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 TCEA1P1-201ENST00000449716 880 ntBASIC5.67□□□□□ -1.5
MMP3P08254 OR52J1P-201ENST00000450596 932 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 FTH1P2-201ENST00000466086 412 ntBASIC5.67□□□□□ -1.5
MMP3P08254 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 RN7SL205P-201ENST00000490174 284 ntBASIC5.67□□□□□ -1.5
MMP3P08254 MTND1P6-201ENST00000523621 946 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AP000619.2-201ENST00000546014 969 ntBASIC5.67□□□□□ -1.5
MMP3P08254 MIR4270-201ENST00000581799 70 ntBASIC5.67□□□□□ -1.5
MMP3P08254 RN7SL52P-201ENST00000584271 284 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.67□□□□□ -1.5
MMP3P08254 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AC012557.1-201ENST00000607115 611 ntBASIC5.67□□□□□ -1.5
MMP3P08254 OR51C1P-201ENST00000608504 942 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AC010632.3-201ENST00000611377 369 ntBASIC5.67□□□□□ -1.5
MMP3P08254 RN7SL722P-201ENST00000617780 284 ntBASIC5.67□□□□□ -1.5
MMP3P08254 RN7SL565P-201ENST00000618246 284 ntBASIC5.67□□□□□ -1.5
MMP3P08254 AL445493.3-201ENST00000619568 477 ntBASIC5.67□□□□□ -1.5
MMP3P08254 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MMP3P08254 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.67□□□□□ -1.5
MMP3P08254 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.67□□□□□ -1.5
MMP3P08254 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP3P08254 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
MMP3P08254 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 MFSD8-216ENST00000641147 4009 ntBASIC5.66□□□□□ -1.5
MMP3P08254 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 NLRP3P1-201ENST00000622303 1785 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC010132.2-201ENST00000295493 1043 ntBASIC5.66□□□□□ -1.5
MMP3P08254 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MMP3P08254 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MMP3P08254 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MMP3P08254 NACAP7-201ENST00000407371 609 ntBASIC5.66□□□□□ -1.5
MMP3P08254 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.66□□□□□ -1.5
MMP3P08254 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 RAB9AP5-201ENST00000437794 597 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 AC011753.3-201ENST00000443436 406 ntBASIC5.66□□□□□ -1.5
MMP3P08254 RAB9AP2-201ENST00000443911 597 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC016772.1-201ENST00000444170 1261 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 AC108729.2-201ENST00000476543 840 ntBASIC5.66□□□□□ -1.5
MMP3P08254 GAPDHP56-201ENST00000506031 988 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC027338.1-201ENST00000514840 825 ntBASIC5.66□□□□□ -1.5
MMP3P08254 RNU6-415P-201ENST00000516252 97 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AP003102.1-201ENST00000525638 661 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 MTND5P21-201ENST00000531961 522 ntBASIC5.66□□□□□ -1.5
MMP3P08254 AC008147.3-201ENST00000548666 354 ntBASIC5.66□□□□□ -1.5
MMP3P08254 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 AC079148.1-201ENST00000565944 819 ntBASIC5.66□□□□□ -1.5
MMP3P08254 BNIP3P31-201ENST00000604515 566 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms