Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TMSB4XP4-201ENST00000323496 618 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 RNU6-670P-201ENST00000364312 104 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL607077.1-201ENST00000401718 499 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL139039.2-201ENST00000407436 479 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
MT-ND1P03886 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC019070.1-201ENST00000415008 1024 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.75□□□□□ -1.65
MT-ND1P03886 MTCO1P45-201ENST00000431457 267 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 TRIM60P13-201ENST00000432350 1283 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AP000281.1-201ENST00000444036 316 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL161636.2-201ENST00000445179 927 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AC017099.1-201ENST00000448261 1028 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 RPL7P45-201ENST00000455851 743 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.75□□□□□ -1.65
MT-ND1P03886 RN7SL346P-201ENST00000491561 294 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.75□□□□□ -1.65
MT-ND1P03886 snoU109.6-201ENST00000516831 118 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC027544.3-201ENST00000535082 757 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC022404.1-201ENST00000555320 273 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.75□□□□□ -1.65
MT-ND1P03886 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.75□□□□□ -1.65
MT-ND1P03886 CYCSP40-201ENST00000575927 294 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 DPRXP4-201ENST00000578053 568 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC008521.2-201ENST00000591021 259 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC104695.2-201ENST00000605056 775 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AC034236.3-201ENST00000605999 461 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MT-ND1P03886 AC092159.4-201ENST00000624944 550 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 LINC01355-201ENST00000566551 5444 ntBASIC4.75□□□□□ -1.65
MT-ND1P03886 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
MT-ND1P03886 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MT-ND1P03886 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
MT-ND1P03886 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MT-ND1P03886 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MT-ND1P03886 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC068446.1-201ENST00000556425 1549 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MT-ND1P03886 RNU6-618P-201ENST00000363518 112 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MT-ND1P03886 MT-TP-201ENST00000387461 68 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC005522.1-201ENST00000395416 346 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AL136116.2-201ENST00000404020 785 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 COX6CP13-201ENST00000428703 226 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC093716.1-201ENST00000435923 377 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 RPS29P10-201ENST00000439197 166 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AL513343.1-201ENST00000451818 792 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 TPRKBP1-201ENST00000456243 481 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AL133445.1-201ENST00000467051 452 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 RPSAP39-201ENST00000467439 883 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AC104629.2-201ENST00000468627 598 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 RN7SL466P-201ENST00000497546 295 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC138938.1-201ENST00000515431 782 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.74□□□□□ -1.65
MT-ND1P03886 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.74□□□□□ -1.65
MT-ND1P03886 AL139254.3-201ENST00000641097 674 ntBASIC4.74□□□□□ -1.65
MT-ND1P03886 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.74□□□□□ -1.65
MT-ND1P03886 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.74□□□□□ -1.65
MT-ND1P03886 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms