Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.85□□□□□ -1.79
SSSCA1O60232 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.85□□□□□ -1.79
SSSCA1O60232 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC093249.4-201ENST00000564755 259 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC023509.5-201ENST00000617434 807 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SSSCA1O60232 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSSCA1O60232 Z95327.2-201ENST00000414579 1873 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.85□□□□□ -1.79
SSSCA1O60232 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC104118.1-201ENST00000607625 1589 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC005332.5-201ENST00000591222 2919 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.84□□□□□ -1.79
SSSCA1O60232 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AL355852.1-201ENST00000454081 1771 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSSCA1O60232 OR56B2P-201ENST00000317102 954 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AL139039.2-201ENST00000407436 479 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.84□□□□□ -1.79
SSSCA1O60232 RNA5SP345-201ENST00000410646 108 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AF186996.5-201ENST00000418098 904 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 DDX39BP1-205ENST00000422507 192 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 RPL7P57-201ENST00000423238 740 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 KNOP1P3-201ENST00000446933 426 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC002553.2-201ENST00000453217 340 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.84□□□□□ -1.79
SSSCA1O60232 RN7SL97P-201ENST00000486780 299 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 RPL37P23-201ENST00000492641 294 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 RN7SL466P-201ENST00000497546 295 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 COX6B1P5-201ENST00000509843 249 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC022826.1-201ENST00000519383 805 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC022882.1-201ENST00000532142 501 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC209154.1-201ENST00000582156 337 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AP000919.1-201ENST00000582850 985 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.84□□□□□ -1.79
SSSCA1O60232 MIR6889-201ENST00000613185 59 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC015660.5-201ENST00000623238 564 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC011815.3-201ENST00000624194 473 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 AC136428.4-201ENST00000634254 1155 ntBASIC3.84□□□□□ -1.79
SSSCA1O60232 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSSCA1O60232 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSSCA1O60232 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
SSSCA1O60232 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSSCA1O60232 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SSSCA1O60232 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSSCA1O60232 MTCO1P15-201ENST00000529569 1526 ntBASIC3.84□□□□□ -1.8
SSSCA1O60232 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.84□□□□□ -1.8
SSSCA1O60232 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.84□□□□□ -1.8
SSSCA1O60232 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SSSCA1O60232 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SSSCA1O60232 HSPA8P18-201ENST00000439846 1928 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.83□□□□□ -1.8
SSSCA1O60232 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
SSSCA1O60232 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSSCA1O60232 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 RNU1-43P-201ENST00000365052 165 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSSCA1O60232 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.83□□□□□ -1.8
SSSCA1O60232 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.83□□□□□ -1.8
SSSCA1O60232 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 EIF4EP1-201ENST00000422311 642 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 IPPKP1-201ENST00000422501 768 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 RPL7L1P9-201ENST00000431298 745 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms