Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RN7SKP199-201ENST00000410325 305 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 RN7SKP222-201ENST00000410651 315 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 Z68694.1-201ENST00000413929 841 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AL596448.1-201ENST00000415024 392 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 LINC01881-201ENST00000416103 412 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 BMS1P17-202ENST00000416720 316 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.88□□□□□ -1.47
FOXN3O00409 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.88□□□□□ -1.47
FOXN3O00409 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.88□□□□□ -1.47
FOXN3O00409 RPL5P2-201ENST00000429598 854 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.88□□□□□ -1.47
FOXN3O00409 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.88□□□□□ -1.47
FOXN3O00409 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.88□□□□□ -1.47
FOXN3O00409 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 RPS3AP53-201ENST00000454716 778 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AC007998.1-201ENST00000474156 672 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
FOXN3O00409 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
FOXN3O00409 SCARNA20.4-201ENST00000516969 131 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AC018442.3-201ENST00000523025 183 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.88□□□□□ -1.47
FOXN3O00409 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.88□□□□□ -1.47
FOXN3O00409 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 AP002802.2-201ENST00000605877 235 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AC018754.1-201ENST00000607486 925 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AL162574.1-201ENST00000615702 950 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AL121890.2-201ENST00000617644 465 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 SNORA11.6-201ENST00000619030 128 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AC068787.1-201ENST00000623908 691 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 AC024023.1-201ENST00000624530 922 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FOXN3O00409 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
FOXN3O00409 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FOXN3O00409 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
FOXN3O00409 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.88□□□□□ -1.47
FOXN3O00409 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FOXN3O00409 LINC01963-201ENST00000562038 3148 ntBASIC5.88□□□□□ -1.47
FOXN3O00409 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
FOXN3O00409 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXN3O00409 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 RNU5B-1-201ENST00000363286 116 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 RNA5SP27-201ENST00000363839 119 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 MIR320B1-201ENST00000390209 79 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 RNA5SP498-201ENST00000411342 120 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 GPS2P1-201ENST00000411761 986 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 OR6E1P-201ENST00000414424 923 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 OR51A6P-201ENST00000418680 1004 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 EIF4A1P1-201ENST00000420241 934 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXN3O00409 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 CYCSP11-201ENST00000436426 315 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC002504.1-201ENST00000438281 691 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 MTND1P26-201ENST00000440488 538 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 RPL36AP39-201ENST00000445859 318 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXN3O00409 AC092685.1-201ENST00000447960 1243 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 EXOSC3P1-201ENST00000448649 500 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 RPL7P48-201ENST00000461513 746 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXN3O00409 AC118282.1-201ENST00000506408 765 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC096571.1-202ENST00000506634 735 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC109481.1-201ENST00000509173 282 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC011411.1-201ENST00000509592 876 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 IMPA1P1-201ENST00000510718 842 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXN3O00409 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXN3O00409 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.87□□□□□ -1.47
FOXN3O00409 OR8G3P-201ENST00000533406 921 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC025260.1-201ENST00000548858 430 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 NDUFA5P11-201ENST00000567995 343 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXN3O00409 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 AC011472.4-201ENST00000615848 491 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC073569.3-201ENST00000619055 682 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AP000770.2-201ENST00000623694 100 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 CU639417.4-201ENST00000623928 207 ntBASIC5.87□□□□□ -1.47
FOXN3O00409 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FOXN3O00409 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
FOXN3O00409 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXN3O00409 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXN3O00409 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms