Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC007537.2-201ENST00000472093 511 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RPS3AP49-201ENST00000472161 790 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7P6-201ENST00000480903 738 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AL117692.1-201ENST00000494283 713 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 FTH1P9-201ENST00000513251 355 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008694.2-201ENST00000517591 306 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AP003033.2-201ENST00000528901 805 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC141257.3-201ENST00000572906 215 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 NDUFA3P1-201ENST00000588007 252 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AL136131.3-201ENST00000607600 188 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AP005432.2-201ENST00000608162 586 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 HBG1-202ENST00000632727 369 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC066616.2-201ENST00000559334 1481 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC068446.1-201ENST00000556425 1549 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MFSD8-236ENST00000641509 4050 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 OTUD4P1-201ENST00000237841 3067 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL159987.1-201ENST00000347911 293 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU1-5P-201ENST00000362684 144 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 EEF1GP6-201ENST00000402309 905 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL078604.1-201ENST00000404609 466 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL080315.1-201ENST00000406055 466 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 U3.32-201ENST00000408116 212 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL365396.1-201ENST00000430854 671 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CFL1P1-202ENST00000432948 411 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RPS11P7-201ENST00000442125 465 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 FHP1-201ENST00000442741 703 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 PPIAP32-201ENST00000449940 472 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL672138.1-201ENST00000450604 1015 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SL423P-201ENST00000486202 304 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 NDUFB4P9-201ENST00000511646 388 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MINOS1P4-201ENST00000515470 318 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RNA5SP73-201ENST00000516744 108 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5D15P-201ENST00000531671 942 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 OR9G2P-201ENST00000533326 880 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CYP4A43P-201ENST00000568156 121 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC027455.1-201ENST00000574104 594 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR4776-2-201ENST00000580204 80 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC069366.1-201ENST00000583159 838 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 UBA2-208ENST00000592791 910 ntTSL 2 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL135786.2-201ENST00000608422 615 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC108359.1-201ENST00000616451 1211 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC118658.2-201ENST00000618697 459 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC010320.5-201ENST00000619124 676 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms