Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC109446.4-201ENST00000623235 2755 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 MIR130A-201ENST00000385274 89 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 MIR937-201ENST00000401271 86 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 CETN4P-201ENST00000432407 469 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 NPM1P18-201ENST00000434232 732 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 ELOCP13-201ENST00000443934 329 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC069277.2-201ENST00000454211 432 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 RPS23P1-201ENST00000491662 432 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC069306.1-201ENST00000507006 843 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 FTH1P11-201ENST00000517577 551 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC010476.1-201ENST00000519111 851 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC138832.1-201ENST00000522871 556 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC004923.2-201ENST00000529649 369 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC084824.2-201ENST00000548906 345 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AGGF1P5-201ENST00000567900 919 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC098935.2-201ENST00000604222 466 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC097478.2-201ENST00000610572 514 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC087683.2-201ENST00000611384 326 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL669942.2-201ENST00000620352 697 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL078595.3-201ENST00000623815 1166 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC068057.2-201ENST00000624047 895 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 FRG1DP-201ENST00000635586 771 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC099654.6-201ENST00000636487 512 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 OR9K1P-202ENST00000641111 3217 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 ZNF733P-202ENST00000444809 1573 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RNU5E-10P-201ENST00000363506 118 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RNA5SP507-201ENST00000363603 121 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AL355615.1-201ENST00000406187 641 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 DPPA2P3-201ENST00000411853 655 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 GTF2IP5-201ENST00000414608 731 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 BX664727.1-201ENST00000416024 466 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RNF10P1-201ENST00000418589 369 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 TCEA1P2-201ENST00000420496 906 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AL133325.1-201ENST00000421090 382 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 PTP4A1P7-201ENST00000423476 514 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AL136231.1-201ENST00000429407 730 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 CYCSP6-201ENST00000434498 302 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 PTMAP6-201ENST00000439110 327 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 MTND1P33-201ENST00000446251 917 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AL627224.1-201ENST00000448334 444 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RPL7P55-201ENST00000450522 746 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RPL23AP23-201ENST00000452590 471 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RN7SL329P-201ENST00000467740 299 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC231760.1-201ENST00000498002 260 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC147055.3-201ENST00000510547 851 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC118942.1-201ENST00000529674 1035 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 NPM1P35-201ENST00000533043 868 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 HMGN2P6-201ENST00000551091 273 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 HSPE1P2-201ENST00000554777 306 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC025918.2-201ENST00000558683 763 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AGGF1P9-201ENST00000561884 913 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC011492.1-201ENST00000600023 315 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AF230666.2-201ENST00000602328 725 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RPP40P2-201ENST00000603596 712 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AP004372.1-201ENST00000604842 844 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 RPSAP73-201ENST00000614820 330 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC009464.1-201ENST00000615731 469 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC078880.5-201ENST00000617845 421 ntBASIC5.97□□□□□ -1.45
SSX2IPQ9Y2D8 AC118658.2-201ENST00000618697 459 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms