Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC021146.3-201ENST00000511911 260 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC134698.5-201ENST00000519444 336 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AP000859.1-201ENST00000525536 307 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 HAUS8P1-201ENST00000549005 542 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 NDUFB4P11-201ENST00000560510 395 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AL121890.2-201ENST00000617644 465 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MIPEPP2-201ENST00000422560 1819 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 MAPK10-286ENST00000641208 8747 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 SNORA2.3-201ENST00000383920 135 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 RNU6-171P-201ENST00000384354 107 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 RN7SKP114-201ENST00000410327 279 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 NPM1P48-201ENST00000436002 853 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 ARL4AP3-201ENST00000441452 574 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC091180.1-201ENST00000462104 372 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC026348.1-201ENST00000462549 1053 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 RN7SL629P-201ENST00000489622 285 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 DEFB109F-201ENST00000491870 277 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 THAP12P4-201ENST00000528321 2266 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 EIF4A2P5-201ENST00000529914 499 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 OR10G5P-201ENST00000532733 358 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AP002373.2-201ENST00000541631 1060 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 IMMP1LP1-201ENST00000605170 488 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AP000894.4-201ENST00000610185 483 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AL121612.2-201ENST00000612261 482 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 uc_338.18-201ENST00000615451 175 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 AC022960.2-201ENST00000616300 666 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 TMEM30CP-203ENST00000637814 1035 ntBASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRAPPC4Q9Y296 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.59□□□□□ -1.68
TRAPPC4Q9Y296 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TRAPPC4Q9Y296 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TRAPPC4Q9Y296 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
TRAPPC4Q9Y296 OR51H2P-202ENST00000641424 3046 ntBASIC4.59□□□□□ -1.68
TRAPPC4Q9Y296 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms