Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 RNU1-64P-201ENST00000365443 163 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 RNA5SP171-201ENST00000391071 115 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 RPS27AP12-201ENST00000429552 465 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 EEF1A1P1-201ENST00000447052 739 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC108463.1-201ENST00000450258 347 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 Y_RNA.719-201ENST00000517156 106 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC034105.4-201ENST00000568304 277 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 RPL12P25-202ENST00000598100 674 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC115286.1-201ENST00000604298 434 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC245389.1-201ENST00000605141 529 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 AC011447.7-201ENST00000624228 1590 ntBASIC7.21□□□□□ -1.25
SHANK2Q9UPX8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHANK2Q9UPX8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.21□□□□□ -1.25
SHANK2Q9UPX8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHANK2Q9UPX8 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHANK2Q9UPX8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AL136231.1-201ENST00000429407 730 ntBASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 ABCC13-202ENST00000463099 3842 ntBASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 MED28P5-201ENST00000528254 438 ntBASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 AC034229.5-201ENST00000624258 185 ntBASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 RBPJP2-201ENST00000618187 1444 ntBASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK2Q9UPX8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AP000756.2-201ENST00000624168 2567 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AL137141.1-201ENST00000624622 4836 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AL022323.4-201ENST00000623980 13120 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 RPL7P32-201ENST00000457119 744 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AC023424.1-201ENST00000496058 459 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AC025164.1-201ENST00000496249 478 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 RN7SL558P-201ENST00000497468 299 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 NPM1P6-201ENST00000521088 871 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK2Q9UPX8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 RPL21P67-201ENST00000402896 478 ntBASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 AC091167.1-201ENST00000492017 396 ntBASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 OR8G5-201ENST00000524943 1041 ntBASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 AL121932.1-201ENST00000605542 214 ntBASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms