Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC012400.1-201ENST00000518452 381 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC009268.1-201ENST00000561352 1203 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC068020.1-201ENST00000594215 661 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC130352.1-201ENST00000602979 661 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC008814.1-201ENST00000603797 406 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC093535.2-201ENST00000624769 2326 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 PCAT14-202ENST00000627127 3935 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 RNA5SP223-201ENST00000365174 120 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AL391361.1-201ENST00000405580 489 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 NCSTNP1-201ENST00000406229 144 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 RPL35AP24-201ENST00000413846 330 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 BX842559.2-201ENST00000451418 605 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 Z92846.1-201ENST00000456203 268 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC015864.1-201ENST00000496512 544 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 MTCYBP19-201ENST00000517463 1124 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC006349.1-201ENST00000555526 235 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 SETP1-201ENST00000556014 845 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC022387.2-201ENST00000604050 448 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC084036.1-201ENST00000609190 508 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AP000864.1-201ENST00000609424 650 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC008115.4-201ENST00000619780 775 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 RPL23AP61-201ENST00000623642 466 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC145207.9-201ENST00000623802 325 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AL451142.2-201ENST00000429076 2090 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC104260.2-201ENST00000623551 3497 ntBASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA9Q9UGM1 AC114947.2-201ENST00000565748 2125 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 U3.3-201ENST00000362986 216 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL607077.1-201ENST00000401718 499 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL034374.1-201ENST00000406329 351 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 MIR1286-201ENST00000408112 78 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 RPS29P10-201ENST00000439197 166 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.73□□□□□ -1.65
CHRNA9Q9UGM1 AC243772.1-201ENST00000451620 410 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms