Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC116562.1-201ENST00000485355 781 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 RN7SL558P-201ENST00000497468 299 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC093763.2-201ENST00000505334 1223 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC007066.2-202ENST00000566531 914 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 MIR4472-2-201ENST00000582069 67 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC011453.2-201ENST00000603737 729 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AL121612.2-201ENST00000612261 482 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC009163.6-201ENST00000612367 342 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AL121890.2-201ENST00000617644 465 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL731566.1-201ENST00000620490 1937 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 SNORA70-201ENST00000384436 135 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 VDAC2P1-201ENST00000399358 958 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 GTF3AP1-201ENST00000416942 1004 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 HSPE1P16-201ENST00000426640 348 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RPS26P4-201ENST00000431743 355 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC023424.1-201ENST00000496058 459 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC140172.1-201ENST00000502928 141 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RN7SKP66-201ENST00000516681 231 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RN7SKP147-201ENST00000517154 244 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RNU6-709P-201ENST00000517257 104 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 MIR3936-201ENST00000584304 110 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC124856.1-201ENST00000600819 896 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC010809.3-201ENST00000621310 641 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 CIR1P2-201ENST00000514821 1342 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
TREX1Q9NSU2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
TREX1Q9NSU2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 C4BPAP1-201ENST00000415474 1893 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 HSPA8P18-201ENST00000439846 1928 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 RN7SKP95-201ENST00000362860 303 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 RNU6-673P-201ENST00000365084 104 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 RN7SKP269-201ENST00000365545 319 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 AP000580.1-201ENST00000404439 358 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TREX1Q9NSU2 VN1R37P-201ENST00000419096 748 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 OR6C64P-201ENST00000419708 825 ntBASIC4.86□□□□□ -1.63
TREX1Q9NSU2 BX510359.3-201ENST00000422168 306 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms