Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RN7SKP149-201ENST00000363008 344 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LITAFQ99732 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LITAFQ99732 RNA5SP241-201ENST00000391326 114 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 EEF1GP6-201ENST00000402309 905 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 CTSL3P-202ENST00000412179 788 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 SETP15-201ENST00000412724 337 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC006960.1-201ENST00000419980 153 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 RPL21P43-201ENST00000425440 472 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 E2F6P1-201ENST00000428850 745 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 RPSAP65-201ENST00000429660 595 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 E2F6P3-201ENST00000441743 743 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 EEF1B2P5-201ENST00000444820 548 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AL929288.2-201ENST00000446368 407 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC012512.1-201ENST00000446594 718 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC016027.4-201ENST00000450866 277 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 MTND4LP3-201ENST00000468320 276 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 MTND3P7-201ENST00000474435 343 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 RPS7P11-201ENST00000484240 586 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 RPS7P6-201ENST00000485777 579 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC012123.2-201ENST00000485809 248 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC098976.1-201ENST00000513014 541 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 RNU6-513P-201ENST00000516104 104 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 MTCO1P49-201ENST00000523429 802 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC124293.1-201ENST00000530034 493 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AC068993.1-201ENST00000546724 589 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC008055.1-201ENST00000547032 609 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 ELOCP32-201ENST00000548625 324 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 DUXAP1-201ENST00000556632 463 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC044913.1-201ENST00000557200 430 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC002400.1-201ENST00000569310 726 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 RN7SL290P-201ENST00000578661 300 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 MIR5705-201ENST00000579870 89 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC022069.1-201ENST00000582910 658 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 EXOSC3P2-201ENST00000594464 497 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AP002884.5-201ENST00000595053 1132 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC068790.7-201ENST00000602347 528 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC124312.4-201ENST00000605533 310 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 OR2AS2P-201ENST00000606902 342 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AP000238.1-201ENST00000608759 426 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AL356274.1-201ENST00000617064 410 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.86□□□□□ -1.79
LITAFQ99732 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC079248.2-201ENST00000623779 326 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC010608.2-201ENST00000624830 470 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 NSRP1P1-201ENST00000444067 1693 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 HSPD1P1-201ENST00000503199 1726 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LITAFQ99732 CASC19-206ENST00000641028 1430 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LITAFQ99732 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LITAFQ99732 AC003973.3-201ENST00000624863 2822 ntBASIC3.85□□□□□ -1.79
LITAFQ99732 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LITAFQ99732 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.85□□□□□ -1.79
LITAFQ99732 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LITAFQ99732 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LITAFQ99732 SGO1P2-201ENST00000429458 1589 ntBASIC3.85□□□□□ -1.79
LITAFQ99732 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LITAFQ99732 AL121950.1-201ENST00000624993 2077 ntBASIC3.85□□□□□ -1.79
LITAFQ99732 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
LITAFQ99732 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LITAFQ99732 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LITAFQ99732 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms