Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AP001858.2-201ENST00000536213 601 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC096553.1-201ENST00000605169 829 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL591167.1-201ENST00000607321 456 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL008723.3-201ENST00000608926 449 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC100793.4-201ENST00000613683 429 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC126175.1-201ENST00000617041 758 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SAMMSON-209ENST00000641222 1100 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL731556.1-201ENST00000394628 3711 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 WBP11P1-201ENST00000562560 1931 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 RNU1-134P-201ENST00000362935 165 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 RNU6-1200P-201ENST00000384162 107 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL050335.1-201ENST00000396909 869 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL096800.1-201ENST00000405326 893 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 U3.43-201ENST00000410734 213 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 PPIAP10-201ENST00000438675 458 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL353898.1-201ENST00000444055 238 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL671855.1-201ENST00000446875 1203 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 IGBP1P3-201ENST00000447449 1000 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 RPL7P1-201ENST00000468161 747 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 RPL7P9-201ENST00000468715 747 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 Y_RNA.667-201ENST00000516212 107 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 NPM1P6-201ENST00000521088 871 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AP004247.1-201ENST00000531556 1289 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC068305.2-201ENST00000550567 1205 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC116553.2-201ENST00000564203 463 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 MIR4489-201ENST00000578869 62 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 MTCYBP22-201ENST00000603788 447 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC073488.3-201ENST00000631611 778 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 CUBNP3-201ENST00000457461 1784 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC022034.1-201ENST00000512867 2156 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 AC091305.2-201ENST00000624049 1576 ntBASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms