Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 RNA5SP132-201ENST00000364725 118 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC004552.1-201ENST00000419089 348 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC093155.2-201ENST00000420734 937 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 IPMKP1-201ENST00000425988 855 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 DSTNP5-201ENST00000427921 523 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AL356981.1-201ENST00000454879 684 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC133473.1-201ENST00000455173 299 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 CTSLP6-201ENST00000458273 1002 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 RPS26P3-201ENST00000470205 348 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 RN7SL809P-201ENST00000482040 297 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC090543.2-201ENST00000483963 348 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC004057.1-201ENST00000485827 348 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC074087.1-201ENST00000512059 724 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 NDUFB4P12-201ENST00000513465 390 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 TRIM77BP-201ENST00000524985 1119 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AL049830.4-201ENST00000555149 351 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC015720.2-201ENST00000567709 334 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 ARGFXP2-201ENST00000579304 949 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AL359091.2-201ENST00000609303 556 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AP002967.1-201ENST00000624203 539 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 AC011266.1-201ENST00000624119 3569 ntBASIC3.72□□□□□ -1.81
AP1S3Q96PC3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
AP1S3Q96PC3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
AP1S3Q96PC3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
AP1S3Q96PC3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RN7SKP275-201ENST00000364626 301 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RNA5SP90-201ENST00000364801 99 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AC019155.1-201ENST00000382242 574 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AP000580.1-201ENST00000404439 358 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AL160275.2-201ENST00000412010 394 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 OR6E1P-201ENST00000414424 923 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AL596448.1-201ENST00000415024 392 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RAC1P3-201ENST00000416129 580 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 BMS1P17-202ENST00000416720 316 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RPS12P5-201ENST00000423449 371 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RPS26P39-201ENST00000469206 341 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AC020890.1-201ENST00000491837 504 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 RN7SL441P-201ENST00000492388 296 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AGGF1P3-201ENST00000493675 1213 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 PPM1AP1-201ENST00000502740 1135 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S3Q96PC3 AC138866.2-201ENST00000508650 584 ntBASIC3.71□□□□□ -1.82
AP1S3Q96PC3 ENPP7P9-201ENST00000514456 627 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms