Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC125336.1-201ENST00000508893 2827 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 ZNF876P-202ENST00000398732 1485 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AP001284.1-201ENST00000528393 2118 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC092070.2-203ENST00000598377 3644 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP435-201ENST00000364044 108 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP394-201ENST00000364216 119 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RNU6-1263P-201ENST00000384601 106 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RN7SKP17-201ENST00000411242 351 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC105402.1-201ENST00000413336 545 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC092647.3-201ENST00000443044 633 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 KATNBL1P3-201ENST00000443475 909 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL050341.1-201ENST00000447743 313 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC112492.1-201ENST00000449607 712 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 NDUFA5P9-201ENST00000472609 340 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 UBFD1P1-201ENST00000473259 814 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC011037.1-201ENST00000483964 558 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 PPIAP19-201ENST00000486414 492 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 RPL7P51-201ENST00000490532 749 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 OR7E157P-201ENST00000494376 911 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC090058.1-201ENST00000498788 435 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 GAPDHP62-201ENST00000515313 990 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 OR5AK3P-201ENST00000527486 1297 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 HMGB1P42-201ENST00000532126 553 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 OR5AM1P-201ENST00000532136 1032 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 MTCO2P15-201ENST00000532655 656 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC069304.3-201ENST00000603938 1084 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC007349.4-201ENST00000608114 532 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC015712.7-201ENST00000615211 635 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AL121895.2-201ENST00000619558 447 ntBASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.3□□□□□ -1.56
CTHRC1Q96CG8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC015689.2-201ENST00000528172 1738 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AL355488.2-201ENST00000609909 2850 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 HMGB1P20-201ENST00000402555 677 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms