Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 MAPK10-286ENST00000641208 8747 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 MIR375-201ENST00000362103 64 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 RNA5SP131-201ENST00000365452 119 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 RNU1-74P-201ENST00000384108 171 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC019070.1-201ENST00000415008 1024 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AL357078.2-201ENST00000416486 427 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC007000.2-201ENST00000442564 487 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AL591473.1-201ENST00000464297 313 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC096741.1-201ENST00000472250 846 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 HMGB3P16-201ENST00000508037 287 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC109481.1-201ENST00000509173 282 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 RNA5SP473-201ENST00000516402 125 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 SNORA43.3-201ENST00000517240 103 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC015849.2-201ENST00000605738 409 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC023813.4-201ENST00000607580 580 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC009779.8-202ENST00000607990 932 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AL096803.3-201ENST00000609032 532 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 MIR6839-201ENST00000620425 113 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC015871.5-202ENST00000623252 701 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC020923.1-201ENST00000624021 917 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 AC119674.1-212ENST00000641155 993 ntBASIC4.69□□□□□ -1.66
RFT1Q96AA3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RFT1Q96AA3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFT1Q96AA3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 OR9G4-201ENST00000302957 984 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 OR52B3P-201ENST00000314715 928 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 RN7SKP275-201ENST00000364626 301 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 OR5M12P-201ENST00000423388 929 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 MTND2P2-201ENST00000434633 945 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC022431.1-201ENST00000450941 438 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC109464.1-201ENST00000511091 819 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC024940.3-201ENST00000538551 316 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC011840.5-201ENST00000582125 771 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC005242.1-201ENST00000585658 438 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AL138895.2-201ENST00000603019 178 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC244107.2-201ENST00000611773 76 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC015914.2-201ENST00000618167 288 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 BX005214.3-202ENST00000619809 325 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC022106.2-201ENST00000620114 757 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 AP002967.1-201ENST00000624203 539 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AL359715.4-201ENST00000606629 1436 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms