Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 CDC27P1-201ENST00000445384 715 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL157385.1-201ENST00000446973 268 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 PPIAP21-201ENST00000464473 501 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 RN7SKP21-201ENST00000516503 220 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 MORF4L1P3-201ENST00000525966 950 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL049830.4-201ENST00000555149 351 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC104971.1-201ENST00000495117 578 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 BTF3P13-201ENST00000513224 490 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 GCSHP4-201ENST00000538792 439 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 MIR134-201ENST00000385258 73 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 ARL4AP5-201ENST00000404372 599 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 CKS1BP6-201ENST00000424932 240 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC004980.4-201ENST00000513375 203 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AGGF1P9-201ENST00000561884 913 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 MIR5096-201ENST00000583713 70 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC011487.3-201ENST00000593607 453 ntBASIC5.04□□□□□ -1.6
SHROOM3Q8TF72 AC133552.1-201ENST00000569988 4007 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 SOCS5P3-201ENST00000425115 1576 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 CASC19-206ENST00000641028 1430 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 LRRC37BP1-201ENST00000398851 714 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 NPM1P37-201ENST00000403105 874 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 RSU1P3-201ENST00000412878 835 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 BX119904.3-201ENST00000428194 957 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AL590399.4-201ENST00000436561 601 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC022034.3-201ENST00000471393 478 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC008147.3-201ENST00000548666 354 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AL109618.2-201ENST00000605527 211 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AL121839.2-201ENST00000565058 6943 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 AC022417.1-201ENST00000624768 1303 ntBASIC5.03□□□□□ -1.6
SHROOM3Q8TF72 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 FAM3C2-201ENST00000312214 681 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC079741.1-201ENST00000321498 212 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 RNU1-82P-201ENST00000390851 165 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms