Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RNU6-152P-201ENST00000384037 107 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 RPL10P10-201ENST00000403509 664 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL136116.2-201ENST00000404020 785 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 MARK2P12-201ENST00000420129 585 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 GAPDHP34-201ENST00000432112 823 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 RPL12P11-201ENST00000439970 501 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 RN7SL174P-201ENST00000475578 289 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC018442.3-201ENST00000523025 183 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC096553.1-201ENST00000605169 829 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC018695.5-201ENST00000605872 315 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 AL139254.3-201ENST00000641097 674 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 CASC19-264ENST00000641912 1184 ntBASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAF3IP1Q8TDR0 STX3-208ENST00000641815 3236 ntBASIC5.34□□□□□ -1.56
TRAF3IP1Q8TDR0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRAF3IP1Q8TDR0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 RN7SKP113-201ENST00000363891 295 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 COX6CP13-201ENST00000428703 226 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 Z99127.2-201ENST00000441426 334 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 VN1R48P-201ENST00000448149 1036 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 IGLVIV-64-201ENST00000518581 301 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 OR8A2P-201ENST00000528631 952 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC074029.2-201ENST00000551045 634 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AP005131.7-201ENST00000610087 611 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 SAMMSON-227ENST00000642114 1199 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 AC073136.1-201ENST00000449426 2884 ntBASIC5.33□□□□□ -1.56
TRAF3IP1Q8TDR0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC104297.1-201ENST00000393779 870 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 RPL35AP24-201ENST00000413846 330 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 OR51A6P-201ENST00000418680 1004 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 RPS4XP16-201ENST00000427198 791 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 TRIM60P13-201ENST00000432350 1283 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC004980.3-201ENST00000447046 365 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 MTND3P4-201ENST00000453537 303 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 RN7SL443P-201ENST00000464331 290 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC011411.1-201ENST00000509592 876 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC024940.3-201ENST00000538551 316 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC068993.1-201ENST00000546724 589 ntBASIC5.32□□□□□ -1.56
TRAF3IP1Q8TDR0 AC127381.1-201ENST00000555979 939 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms