Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 AC015912.2-201ENST00000571053 181 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 AC008782.1-201ENST00000603386 430 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
VPS8Q8N3P4 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.4□□□□□ -1.23
VPS8Q8N3P4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
VPS8Q8N3P4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 MIR129-1-201ENST00000384972 72 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AL136455.1-201ENST00000441083 1240 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AC090686.1-201ENST00000481577 749 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AC007016.1-201ENST00000512110 244 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 OR7A19P-201ENST00000608051 733 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 CASC19-206ENST00000641028 1430 ntBASIC7.39□□□□□ -1.23
VPS8Q8N3P4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS8Q8N3P4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AC017079.1-201ENST00000333650 415 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AC104651.2-201ENST00000447549 528 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AC090602.1-201ENST00000469695 252 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AK4P6-201ENST00000505168 528 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AC111000.3-201ENST00000508057 576 ntBASIC7.38□□□□□ -1.23
VPS8Q8N3P4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS8Q8N3P4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 RPS3AP23-201ENST00000401762 784 ntBASIC7.37□□□□□ -1.23
VPS8Q8N3P4 RPS4XP9-201ENST00000405151 780 ntBASIC7.37□□□□□ -1.23
VPS8Q8N3P4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 HMGB1P32-201ENST00000425971 565 ntBASIC7.37□□□□□ -1.23
VPS8Q8N3P4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 AC010503.3-201ENST00000594355 540 ntBASIC7.37□□□□□ -1.23
VPS8Q8N3P4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS8Q8N3P4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AC090142.1-201ENST00000465776 462 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 RPL5P22-201ENST00000480199 884 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 HIGD1AP5-201ENST00000529959 259 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 RN7SL652P-201ENST00000577769 300 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AP005119.2-201ENST00000579735 1105 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AC115286.1-201ENST00000604298 434 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AC021106.3-201ENST00000623925 531 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 U3.53-201ENST00000628922 216 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 AP000550.3-201ENST00000637734 379 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 Z98755.1-201ENST00000407015 1384 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 SCARNA15-201ENST00000607520 4325 ntBASIC7.36□□□□□ -1.23
VPS8Q8N3P4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS8Q8N3P4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms