Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL049610.1-201ENST00000423374 372 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 KCTD9P1-201ENST00000430462 1167 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC110602.1-201ENST00000437414 318 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL138787.1-202ENST00000437804 898 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 MTND4P18-201ENST00000447010 465 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 PPIAP7-201ENST00000454070 489 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RPL7P40-201ENST00000481703 745 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 NCOR1P1-202ENST00000486162 291 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 HSPE1P23-201ENST00000509838 286 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC022447.1-201ENST00000515358 464 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC023632.1-201ENST00000518463 375 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AP000620.1-201ENST00000527147 504 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 HIGD1AP10-201ENST00000527837 282 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 MIR3912-201ENST00000577566 105 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC022146.1-201ENST00000595307 847 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 WISP1-OT1-201ENST00000602893 642 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC091193.1-201ENST00000604640 448 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RBM11P1-201ENST00000604951 799 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AP001437.1-201ENST00000608783 456 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RN7SL261P-201ENST00000613441 282 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC008083.4-201ENST00000615076 444 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC092192.1-201ENST00000633154 1018 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL133243.2-201ENST00000610331 1621 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC105749.1-201ENST00000631338 2008 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC011369.2-201ENST00000624423 1567 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL731532.1-201ENST00000623972 4236 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-1215P-201ENST00000384441 102 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 Y_RNA.517-201ENST00000384551 106 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MT-TP-201ENST00000387461 68 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 SNORA77.2-201ENST00000408571 112 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MIR1282-201ENST00000408865 101 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC013404.1-201ENST00000413068 249 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 CEACAMP8-201ENST00000413902 580 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MTCO2P34-201ENST00000421994 607 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MTND4LP11-201ENST00000422184 280 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 GTF2IP23-201ENST00000423746 351 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC093084.1-201ENST00000424233 687 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 CENPIP1-201ENST00000425713 902 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC009784.1-201ENST00000426484 460 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 HMGB1P45-201ENST00000435986 653 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC016908.1-201ENST00000442571 1219 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 RPS26P30-201ENST00000443431 335 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 BMI1P1-201ENST00000445879 941 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC097463.1-201ENST00000447288 481 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms