Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AL391422.1-201ENST00000402155 436 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 SNORA11.5-201ENST00000408163 128 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RN7SKP199-201ENST00000410325 305 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RN7SKP114-201ENST00000410327 279 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RN7SKP247-201ENST00000411094 308 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 Z68694.1-201ENST00000413929 841 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 SCAND3P1-201ENST00000439854 1060 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC084754.1-201ENST00000463466 464 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RN7SL547P-201ENST00000490793 290 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC010350.1-201ENST00000504908 231 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RNA5SP464-201ENST00000516251 108 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC022826.1-201ENST00000519383 805 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC087477.6-201ENST00000559595 843 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 MIR4675-201ENST00000577898 77 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC087783.2-201ENST00000605070 562 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 RN7SL787P-201ENST00000613000 284 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AC087821.1-201ENST00000623639 567 ntBASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUDCD3Q8IVD9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC027228.2-201ENST00000567141 2154 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 RNU1-83P-201ENST00000363426 164 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 OR51A6P-201ENST00000418680 1004 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 HMGN1P36-201ENST00000446623 298 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 RPS26P41-201ENST00000450370 284 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC027544.3-201ENST00000535082 757 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUDCD3Q8IVD9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms