Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC027369.5-201ENST00000533838 755 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC106730.2-201ENST00000566641 540 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 SNORD95-201ENST00000579879 68 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC007204.2-201ENST00000615022 616 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC109583.2-201ENST00000617367 129 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AL691477.1-201ENST00000624398 162 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC024023.1-201ENST00000624530 922 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 SNORA17.5-201ENST00000630429 132 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 MIR4302-201ENST00000638058 60 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC090017.1-201ENST00000548612 1779 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NHLRC1Q6VVB1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL360270.2-201ENST00000562952 5985 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 RNU6-185P-201ENST00000384421 107 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL133388.1-201ENST00000404509 287 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 GSTM3P2-201ENST00000412746 530 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 Z93019.1-201ENST00000416450 973 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 PTP4A1P3-201ENST00000433661 420 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 GAPDHP25-201ENST00000447061 1001 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 RPL7AP52-201ENST00000458096 790 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 RPL23AP12-201ENST00000467573 473 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC092754.1-201ENST00000472975 479 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 CBX1P5-201ENST00000475330 559 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 RN7SL717P-201ENST00000478343 297 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC111193.1-201ENST00000504097 155 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC098799.1-201ENST00000504752 800 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC126177.5-201ENST00000549599 178 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC123786.2-201ENST00000603459 275 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AL589674.2-201ENST00000604304 337 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 MIR6862-1-201ENST00000613016 70 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 MIR6862-2-201ENST00000614755 70 ntBASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NHLRC1Q6VVB1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 PHKBP1-201ENST00000450951 1951 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SMG1P6-201ENST00000532337 2930 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNA5SP183-201ENST00000362452 119 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNA5SP132-201ENST00000364725 118 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms