Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 GAPDHP14-201ENST00000450472 937 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CABYRP1-201ENST00000465493 1045 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RN7SL184P-201ENST00000488308 297 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC020699.1-201ENST00000505161 445 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC022360.1-201ENST00000521058 340 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 MTATP6P15-201ENST00000527233 835 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 NPM1P35-201ENST00000533043 868 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AL359219.2-201ENST00000555184 348 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RPL10P14-201ENST00000565265 298 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 MTCO2P2-201ENST00000591258 225 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC100847.1-201ENST00000611316 481 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC245389.2-201ENST00000616023 576 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AL355493.4-201ENST00000618530 292 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC242843.1-201ENST00000618702 573 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC026124.2-201ENST00000621847 656 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC091932.2-201ENST00000623014 291 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AP003476.1-201ENST00000623984 516 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 SNORA17.5-201ENST00000630429 132 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AL138820.1-201ENST00000617901 5305 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 MUC2-202ENST00000613187 4845 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC005294.1-201ENST00000355509 281 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RNA5SP242-201ENST00000364171 118 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZNF885P-201ENST00000420174 1098 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 XKRYP1-201ENST00000423438 492 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 XKRYP2-201ENST00000432915 492 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC090018.1-201ENST00000434369 367 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RPL7P45-201ENST00000455851 743 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC079168.1-201ENST00000458741 345 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RN7SL717P-201ENST00000478343 297 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AL049874.2-201ENST00000492636 288 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC108157.1-201ENST00000510511 539 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RNU6-941P-201ENST00000516346 108 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC021451.1-201ENST00000523498 1129 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 HMGB1P40-201ENST00000525121 540 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AP003066.2-201ENST00000529375 555 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC074029.2-201ENST00000551045 634 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 MRPS36P5-201ENST00000551909 298 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC040958.1-201ENST00000561102 201 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC090666.1-201ENST00000578241 445 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 PRPF19P1-201ENST00000584766 898 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC025165.5-201ENST00000602802 578 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AL589674.2-201ENST00000604304 337 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AC005252.1-201ENST00000604518 1063 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 CYCSP41-201ENST00000616920 296 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 AP003499.2-201ENST00000624100 483 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 FRG1EP-201ENST00000634469 770 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms