Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AC007159.1-201ENST00000566529 4706 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 RNU1-130P-201ENST00000363930 160 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 RNU11-201ENST00000387069 134 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 RPL7P58-201ENST00000402913 758 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AL356387.2-201ENST00000422272 243 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 AL360012.1-201ENST00000602813 131 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42BPAQ5VT25 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 RGS17P1-201ENST00000423358 553 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 ACTR3P2-201ENST00000439585 1257 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AC100784.1-201ENST00000522790 310 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 OR7A19P-201ENST00000608051 733 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AL049536.1-201ENST00000625043 744 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AC021146.4-201ENST00000309229 279 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AL451139.1-201ENST00000434718 346 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 FTH1P16-201ENST00000435241 552 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 SCARNA10-201ENST00000459255 330 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AC010618.1-201ENST00000469924 477 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 MIR1254-2-201ENST00000579553 63 ntBASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42BPAQ5VT25 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 U3.35-201ENST00000408405 208 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 CYCSP34-201ENST00000458172 304 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 NPM1P6-201ENST00000521088 871 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AC084824.1-201ENST00000550917 1005 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AL049830.4-201ENST00000555149 351 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 AC090181.2-201ENST00000602975 672 ntBASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42BPAQ5VT25 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AC008033.1-201ENST00000216407 1162 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AP000580.1-201ENST00000404439 358 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 RPL17P36-201ENST00000420302 549 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AP000619.2-201ENST00000546014 969 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AP003497.2-201ENST00000624220 967 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AC090017.1-201ENST00000548612 1779 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AL031119.1-201ENST00000404707 1879 ntBASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
CDC42BPAQ5VT25 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.1□□□□□ -1.27
CDC42BPAQ5VT25 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms