Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RFX4Q33E94 LRRC37BP1-201ENST00000398851 714 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 MIR1182-201ENST00000408363 97 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RNA5SP178-201ENST00000410380 128 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RN7SKP293-201ENST00000411389 296 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AC009237.10-201ENST00000414112 510 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX4Q33E94 FABP7P1-201ENST00000424004 391 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 CYCSP6-201ENST00000434498 302 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX4Q33E94 AL450023.3-201ENST00000440592 271 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 Z80107.2-201ENST00000445127 392 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AL591363.1-201ENST00000450091 483 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AL691482.1-201ENST00000453255 87 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RPS6P2-201ENST00000454208 705 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RN7SL515P-201ENST00000463999 297 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RN7SL558P-201ENST00000497468 299 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 RN7SL466P-201ENST00000497546 295 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX4Q33E94 Y_RNA.719-201ENST00000517156 106 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX4Q33E94 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.62□□□□□ -1.67
RFX4Q33E94 AC090888.3-201ENST00000558917 509 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.62□□□□□ -1.67
RFX4Q33E94 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 AP005432.2-201ENST00000608162 586 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AC234782.5-201ENST00000617723 324 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 AC087821.1-201ENST00000623639 567 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 CYP4F35P-202ENST00000636121 390 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RFX4Q33E94 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RFX4Q33E94 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RFX4Q33E94 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RFX4Q33E94 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
RFX4Q33E94 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 CR382285.2-201ENST00000624662 1495 ntBASIC4.62□□□□□ -1.67
RFX4Q33E94 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 CASC19-204ENST00000641001 2055 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
RFX4Q33E94 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX4Q33E94 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 RNU1-83P-201ENST00000363426 164 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFX4Q33E94 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 U3.35-201ENST00000408405 208 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 VDAC1P9-201ENST00000412766 841 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 RPL21P108-201ENST00000413857 481 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 AL358176.3-201ENST00000420757 454 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 AC079807.1-201ENST00000429993 481 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 RPL5P16-201ENST00000471467 790 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 RN7SL799P-201ENST00000475891 298 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.61□□□□□ -1.67
RFX4Q33E94 RN7SL547P-201ENST00000490793 290 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 DEFB109F-201ENST00000491870 277 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 GTF2F2P1-201ENST00000511083 675 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 GSTP1P1-201ENST00000548078 319 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.61□□□□□ -1.67
RFX4Q33E94 AC234775.3-201ENST00000564612 656 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX4Q33E94 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.61□□□□□ -1.67
RFX4Q33E94 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 AL121890.2-201ENST00000617644 465 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.61□□□□□ -1.67
RFX4Q33E94 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX4Q33E94 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFX4Q33E94 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX4Q33E94 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX4Q33E94 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX4Q33E94 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
RFX4Q33E94 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFX4Q33E94 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms