Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL138878.2-201ENST00000440581 1241 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 TXNP5-201ENST00000441043 315 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 RBMY2TP-201ENST00000451162 947 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL691482.1-201ENST00000453255 87 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL513533.1-201ENST00000453728 415 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC027369.5-201ENST00000533838 755 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC022884.2-201ENST00000578535 580 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC104687.2-201ENST00000604442 342 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL391358.1-201ENST00000605342 190 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC096586.2-201ENST00000610260 441 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL162574.1-201ENST00000615702 950 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 RNA5SP332-201ENST00000391063 115 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 RN7SKP16-201ENST00000410180 299 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC092570.3-201ENST00000420113 693 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 BX276092.6-201ENST00000430476 250 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 SCAND3P1-201ENST00000439854 1060 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AL450023.3-201ENST00000440592 271 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 BX842559.2-201ENST00000451418 605 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AURKAPS2-201ENST00000454983 333 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 BX276092.8-201ENST00000455722 250 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC092905.1-201ENST00000467527 949 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 OR9N1P-201ENST00000491296 333 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 OR5M2P-201ENST00000529003 936 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 AF230666.2-201ENST00000602328 725 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM1Q2M3G4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 SNORA81-201ENST00000408493 178 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 TBCAP2-201ENST00000416175 326 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC245028.1-201ENST00000423259 256 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 RPL5P2-201ENST00000429598 854 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC016712.1-201ENST00000431088 378 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC002553.2-201ENST00000453217 340 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 RPS17P2-201ENST00000461663 408 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC098583.1-201ENST00000480875 255 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 OR11I1P-201ENST00000486033 954 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms