Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AC091304.9-201ENST00000612091 226 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 AP005264.7-201ENST00000625003 745 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 AC138393.1-206ENST00000540997 1886 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX4Q06945 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 VN2R3P-201ENST00000422626 1412 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 AC008033.1-201ENST00000216407 1162 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 Y_RNA.18-201ENST00000362461 102 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 RNA5SP433-201ENST00000364491 114 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 RNU4-12P-201ENST00000365233 139 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 RPS27AP11-201ENST00000402798 447 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 FGF7P8-201ENST00000402994 292 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 ARL4AP5-201ENST00000404372 599 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 RNA5SP80-201ENST00000410475 111 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC002524.1-201ENST00000411687 547 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX4Q06945 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 GLRXP1-201ENST00000423261 334 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC012498.1-201ENST00000424037 437 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC115283.1-201ENST00000427353 400 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 TMX2P1-201ENST00000436507 708 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC110602.1-201ENST00000437414 318 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AMYP1-201ENST00000440059 1023 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC016908.1-201ENST00000442571 1219 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 RPS27AP2-201ENST00000457576 465 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 RN7SL326P-201ENST00000477493 296 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 RPL34P33-201ENST00000486062 334 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC107398.1-201ENST00000486904 505 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 RN7SKP298-201ENST00000515950 94 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 IGKV3D-25-201ENST00000519599 235 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 RAB11AP2-201ENST00000545905 639 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 AC002310.3-201ENST00000569728 723 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX4Q06945 AC133552.5-201ENST00000604266 540 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AL390816.3-201ENST00000604527 1066 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC097467.4-201ENST00000605504 141 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 SNORA74.4-201ENST00000607595 199 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AC106028.5-201ENST00000610332 395 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SOX4Q06945 CR381653.2-201ENST00000624041 768 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 AP001052.1-201ENST00000626421 99 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 AL132640.3-201ENST00000630473 177 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 AL591848.4-201ENST00000567832 3472 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 MTND4P12-201ENST00000498999 1377 ntBASIC6.79□□□□□ -1.32
SOX4Q06945 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX4Q06945 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SOX4Q06945 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX4Q06945 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms