Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC011492.1-201ENST00000600023 315 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC234772.3-201ENST00000602277 528 ntBASIC5.04□□□□□ -1.6
LTBQ06643 CYCSP41-201ENST00000616920 296 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AL645927.2-201ENST00000618350 349 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC241377.1-201ENST00000619797 406 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 AC087565.3-203ENST00000641018 837 ntBASIC5.04□□□□□ -1.6
LTBQ06643 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.04□□□□□ -1.6
LTBQ06643 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LTBQ06643 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 NCOA4P2-201ENST00000340589 1813 ntBASIC5.03□□□□□ -1.6
LTBQ06643 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 RPL22P22-201ENST00000395439 379 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AP002530.1-201ENST00000405705 684 ntBASIC5.03□□□□□ -1.6
LTBQ06643 RMRPP5-201ENST00000411156 267 ntBASIC5.03□□□□□ -1.6
LTBQ06643 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 AC079809.1-201ENST00000415468 276 ntBASIC5.03□□□□□ -1.6
LTBQ06643 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 ARL2BPP3-201ENST00000421226 480 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC007161.1-204ENST00000423039 460 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC092648.1-201ENST00000425870 423 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AL590762.4-201ENST00000425885 253 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AL662874.1-201ENST00000426065 230 ntBASIC5.03□□□□□ -1.6
LTBQ06643 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 EXOSC3P1-201ENST00000448649 500 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 LRRC37A14P-201ENST00000452297 462 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.03□□□□□ -1.6
LTBQ06643 ABCC13-202ENST00000463099 3842 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC005532.2-201ENST00000467154 373 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC020898.1-201ENST00000474167 787 ntBASIC5.03□□□□□ -1.6
LTBQ06643 CBX1P5-201ENST00000475330 559 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC087672.1-201ENST00000479876 766 ntBASIC5.03□□□□□ -1.6
LTBQ06643 CEACAMP10-202ENST00000495431 496 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 GOLGA5P1-201ENST00000507317 980 ntBASIC5.03□□□□□ -1.6
LTBQ06643 OR51K1P-201ENST00000510214 950 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 AL671862.1-201ENST00000515851 349 ntBASIC5.03□□□□□ -1.6
LTBQ06643 RNU6-615P-201ENST00000516065 106 ntBASIC5.03□□□□□ -1.6
LTBQ06643 SNORA43.3-201ENST00000517240 103 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.03□□□□□ -1.6
LTBQ06643 PMS2P3-207ENST00000529061 717 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC118942.1-201ENST00000529674 1035 ntBASIC5.03□□□□□ -1.6
LTBQ06643 OR5AM1P-201ENST00000532136 1032 ntBASIC5.03□□□□□ -1.6
LTBQ06643 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.03□□□□□ -1.6
LTBQ06643 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.03□□□□□ -1.6
LTBQ06643 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
LTBQ06643 AC008751.2-201ENST00000597885 980 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 AC008759.3-201ENST00000613300 508 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC025574.2-201ENST00000615621 514 ntBASIC5.03□□□□□ -1.6
LTBQ06643 MIR1264-201ENST00000616374 69 ntBASIC5.03□□□□□ -1.6
LTBQ06643 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LTBQ06643 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.03□□□□□ -1.6
LTBQ06643 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.03□□□□□ -1.6
LTBQ06643 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LTBQ06643 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
LTBQ06643 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 AC144833.1-201ENST00000567953 4089 ntBASIC5.02□□□□□ -1.61
LTBQ06643 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.02□□□□□ -1.61
LTBQ06643 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LTBQ06643 AC093909.5-201ENST00000621839 1799 ntBASIC5.02□□□□□ -1.61
LTBQ06643 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
LTBQ06643 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LTBQ06643 RNU5E-10P-201ENST00000363506 118 ntBASIC5.02□□□□□ -1.61
LTBQ06643 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms