Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.49□□□□□ -1.69
CX3CL1P78423 IGBP1P1-201ENST00000554337 1009 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.49□□□□□ -1.69
CX3CL1P78423 NPM1P47-201ENST00000560843 856 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.49□□□□□ -1.69
CX3CL1P78423 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 AC099785.1-201ENST00000605697 437 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CL1P78423 AP005431.1-201ENST00000618479 319 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AC023510.2-201ENST00000622162 746 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CL1P78423 AP003497.2-201ENST00000624220 967 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AL390318.1-201ENST00000624564 687 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AP003485.1-201ENST00000625093 753 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 AC013437.2-201ENST00000639587 677 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 SAMMSON-209ENST00000641222 1100 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CL1P78423 MIR193BHG-214ENST00000641765 509 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 AL360270.2-201ENST00000562952 5985 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CL1P78423 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 MRE11P1-201ENST00000464884 2127 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CL1P78423 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.49□□□□□ -1.69
CX3CL1P78423 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.49□□□□□ -1.69
CX3CL1P78423 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
CX3CL1P78423 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CL1P78423 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CL1P78423 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 AP005432.1-201ENST00000580891 3485 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC007938.2-201ENST00000604666 2634 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 SNORA62.2-201ENST00000364672 152 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 RNA5SP510-201ENST00000364697 99 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CL1P78423 SNORA11.5-201ENST00000408163 128 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 MIR1282-201ENST00000408865 101 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AP000357.1-201ENST00000409926 1165 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 TCEA1P2-201ENST00000420496 906 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 OR10T1P-201ENST00000424327 947 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CL1P78423 ELOCP6-201ENST00000429066 328 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC002069.1-201ENST00000429649 1159 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 NXT1P1-201ENST00000458481 316 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 ELOCP12-201ENST00000458706 328 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC110749.1-201ENST00000462007 357 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC084754.1-201ENST00000463466 464 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 UBFD1P1-201ENST00000473259 814 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC104982.1-201ENST00000478775 574 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 EIF1P7-201ENST00000487533 337 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 DUTP7-201ENST00000507982 486 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 SNORD46.2-201ENST00000516021 102 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 RNU6-615P-201ENST00000516065 106 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 CYCSP22-201ENST00000517555 339 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 FTH1P11-201ENST00000517577 551 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 MRPS16P1-201ENST00000523462 412 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC025260.1-201ENST00000548858 430 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 HSPE1P2-201ENST00000554777 306 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 DPPA2P4-201ENST00000563717 878 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC010735.1-201ENST00000567305 1026 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms