Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC090079.2-201ENST00000575289 768 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 RN7SL356P-201ENST00000582228 248 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 VN1R84P-201ENST00000593697 235 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 MTATP6P2-201ENST00000603319 678 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AC090525.3-201ENST00000605601 189 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.4□□□□□ -1.39
RHBDL3P58872 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.4□□□□□ -1.39
RHBDL3P58872 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
RHBDL3P58872 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.4□□□□□ -1.39
RHBDL3P58872 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RHBDL3P58872 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RHBDL3P58872 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 MIR16-2-201ENST00000362117 81 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 SNORA62.2-201ENST00000364672 152 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 LINC02210-201ENST00000444561 288 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC073850.1-201ENST00000449243 255 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 CYCSP42-201ENST00000450823 238 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 RN7SL809P-201ENST00000482040 297 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 AC016550.1-201ENST00000505348 785 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC112518.2-201ENST00000508565 425 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC091912.1-201ENST00000511351 248 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RHBDL3P58872 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.39□□□□□ -1.39
RHBDL3P58872 AL137072.1-201ENST00000603444 466 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 uc_338.9-201ENST00000617424 182 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.39□□□□□ -1.39
RHBDL3P58872 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.39□□□□□ -1.39
RHBDL3P58872 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RHBDL3P58872 MTCO1P4-201ENST00000520516 1409 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 AC073429.2-201ENST00000569694 1444 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 NLRP3P1-201ENST00000622303 1785 ntBASIC6.39□□□□□ -1.39
RHBDL3P58872 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.39□□□□□ -1.39
RHBDL3P58872 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RHBDL3P58872 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 RNU2-50P-201ENST00000410494 143 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 UBE2D3P3-201ENST00000426992 425 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AL590399.2-201ENST00000427536 309 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 RPS24P8-201ENST00000431490 402 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 RPS27P18-201ENST00000431701 247 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AL353093.1-201ENST00000441292 436 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 RPL7P61-201ENST00000451721 751 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 Z92846.1-201ENST00000456203 268 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 RPL23AP12-201ENST00000467573 473 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 BUD31P1-201ENST00000521828 359 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC015911.5-201ENST00000587076 451 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC015712.7-201ENST00000615211 635 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 SOCS5P3-201ENST00000425115 1576 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms