Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.76□□□□□ -1.81
CMC4P56277 AC138832.1-201ENST00000522871 556 ntBASIC3.76□□□□□ -1.81
CMC4P56277 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.76□□□□□ -1.81
CMC4P56277 AC025857.1-201ENST00000525252 377 ntBASIC3.76□□□□□ -1.81
CMC4P56277 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.76□□□□□ -1.81
CMC4P56277 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.76□□□□□ -1.81
CMC4P56277 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.76□□□□□ -1.81
CMC4P56277 AC087763.1-201ENST00000603391 286 ntBASIC3.76□□□□□ -1.81
CMC4P56277 AL512624.1-201ENST00000613638 469 ntBASIC3.76□□□□□ -1.81
CMC4P56277 AL049794.2-201ENST00000616301 365 ntBASIC3.76□□□□□ -1.81
CMC4P56277 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CMC4P56277 AC092070.2-203ENST00000598377 3644 ntBASIC3.76□□□□□ -1.81
CMC4P56277 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CMC4P56277 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.76□□□□□ -1.81
CMC4P56277 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CMC4P56277 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CMC4P56277 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CMC4P56277 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CMC4P56277 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 RNA5SP455-201ENST00000365190 119 ntBASIC3.75□□□□□ -1.81
CMC4P56277 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 AL358178.1-201ENST00000407698 397 ntBASIC3.75□□□□□ -1.81
CMC4P56277 RN7SKP273-201ENST00000411392 314 ntBASIC3.75□□□□□ -1.81
CMC4P56277 RPL12P9-201ENST00000412942 488 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 GJA6P-201ENST00000415117 1042 ntBASIC3.75□□□□□ -1.81
CMC4P56277 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.75□□□□□ -1.81
CMC4P56277 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AC092162.1-201ENST00000432828 434 ntBASIC3.75□□□□□ -1.81
CMC4P56277 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 SLC25A18P1-201ENST00000449385 454 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 OR7L1P-201ENST00000456181 380 ntBASIC3.75□□□□□ -1.81
CMC4P56277 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 RPL7AP6-201ENST00000477943 801 ntBASIC3.75□□□□□ -1.81
CMC4P56277 RN7SL727P-201ENST00000482164 296 ntBASIC3.75□□□□□ -1.81
CMC4P56277 COX6B1P2-201ENST00000489624 230 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AC140172.1-201ENST00000502928 141 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AC010350.1-201ENST00000504908 231 ntBASIC3.75□□□□□ -1.81
CMC4P56277 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 RNA5SP230-201ENST00000517039 122 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.75□□□□□ -1.81
CMC4P56277 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 AC016769.4-201ENST00000616893 535 ntBASIC3.75□□□□□ -1.81
CMC4P56277 AC074140.1-201ENST00000621617 208 ntBASIC3.75□□□□□ -1.81
CMC4P56277 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 FRG1EP-201ENST00000634469 770 ntBASIC3.75□□□□□ -1.81
CMC4P56277 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.75□□□□□ -1.81
CMC4P56277 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.75□□□□□ -1.81
CMC4P56277 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 ECM1P2-201ENST00000503354 1577 ntBASIC3.75□□□□□ -1.81
CMC4P56277 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CMC4P56277 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CMC4P56277 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.75□□□□□ -1.81
CMC4P56277 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.74□□□□□ -1.81
CMC4P56277 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.74□□□□□ -1.81
CMC4P56277 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CMC4P56277 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.74□□□□□ -1.81
CMC4P56277 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 RNU6-249P-201ENST00000363016 102 ntBASIC3.74□□□□□ -1.81
CMC4P56277 SNORA73.1-201ENST00000363107 205 ntBASIC3.74□□□□□ -1.81
CMC4P56277 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 ATP5HP3-201ENST00000396994 486 ntBASIC3.74□□□□□ -1.81
CMC4P56277 AL645733.1-201ENST00000402250 217 ntBASIC3.74□□□□□ -1.81
CMC4P56277 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.74□□□□□ -1.81
CMC4P56277 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CMC4P56277 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CMC4P56277 BX510359.3-201ENST00000422168 306 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms