Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 VN1R12P-201ENST00000403778 876 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 RNU6-272P-201ENST00000411028 104 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.9□□□□□ -1.46
GFRA1P56159 AL139184.1-202ENST00000422303 222 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 MRPS10P2-201ENST00000431226 381 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 LARP1BP3-201ENST00000437229 869 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC091862.1-201ENST00000438016 1100 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
GFRA1P56159 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 RPS7P7-201ENST00000463499 571 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC091544.1-201ENST00000484702 348 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC063943.2-201ENST00000495697 534 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC108078.3-201ENST00000502633 489 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 IGHV3-57-201ENST00000520143 280 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 SLC2A13P1-201ENST00000531560 322 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 GTF2IP22-201ENST00000554443 182 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC093519.1-201ENST00000566109 298 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA1P56159 AC063977.7-201ENST00000594454 337 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC009237.13-201ENST00000603193 276 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC012368.3-201ENST00000604190 219 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC009237.12-201ENST00000604755 742 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC011891.2-201ENST00000604949 397 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 AC138932.5-201ENST00000617759 563 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC012414.7-202ENST00000622705 1090 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC079228.1-201ENST00000624774 1049 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.9□□□□□ -1.46
GFRA1P56159 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.9□□□□□ -1.47
GFRA1P56159 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
GFRA1P56159 OR5BR1P-201ENST00000524992 1330 ntBASIC5.9□□□□□ -1.47
GFRA1P56159 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
GFRA1P56159 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.9□□□□□ -1.47
GFRA1P56159 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.47
GFRA1P56159 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.9□□□□□ -1.47
GFRA1P56159 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA1P56159 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.89□□□□□ -1.47
GFRA1P56159 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GFRA1P56159 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GFRA1P56159 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 AC010168.2-201ENST00000562691 5428 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 MRE11P1-201ENST00000464884 2127 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 CASC19-228ENST00000641414 1684 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 Y_RNA.25-201ENST00000362528 102 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 THEM7P-201ENST00000419556 672 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC092647.1-201ENST00000420654 287 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GFRA1P56159 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC010975.2-201ENST00000427781 588 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.89□□□□□ -1.47
GFRA1P56159 EPS15P1-201ENST00000448836 336 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 AL139156.3-201ENST00000454802 394 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms