Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 AC006210.2-201ENST00000367074 1545 ntBASIC5.1□□□□□ -1.59
CDH13P55290 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 RN7SKP16-201ENST00000410180 299 ntBASIC5.1□□□□□ -1.59
CDH13P55290 RNA5SP487-201ENST00000410186 122 ntBASIC5.1□□□□□ -1.59
CDH13P55290 CTSL3P-202ENST00000412179 788 ntBASIC5.1□□□□□ -1.59
CDH13P55290 SDHDP6-201ENST00000414693 480 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 HSPE1P16-201ENST00000426640 348 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AP000281.1-201ENST00000444036 316 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH13P55290 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH13P55290 BX842559.2-201ENST00000451418 605 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AC021205.1-201ENST00000468797 348 ntBASIC5.1□□□□□ -1.59
CDH13P55290 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 RPL23AP73-201ENST00000492507 471 ntBASIC5.1□□□□□ -1.59
CDH13P55290 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH13P55290 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH13P55290 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH13P55290 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.1□□□□□ -1.59
CDH13P55290 HMGB1P40-201ENST00000525121 540 ntBASIC5.1□□□□□ -1.59
CDH13P55290 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH13P55290 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 RPL10P14-201ENST00000565265 298 ntBASIC5.1□□□□□ -1.59
CDH13P55290 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH13P55290 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 AC008814.1-201ENST00000603797 406 ntBASIC5.1□□□□□ -1.59
CDH13P55290 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH13P55290 MIR1264-201ENST00000616374 69 ntBASIC5.1□□□□□ -1.59
CDH13P55290 MIR6778-201ENST00000617912 73 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AP006248.3-201ENST00000623580 594 ntBASIC5.1□□□□□ -1.59
CDH13P55290 AC090617.9-201ENST00000623751 147 ntBASIC5.1□□□□□ -1.59
CDH13P55290 MIR1910-201ENST00000636955 80 ntBASIC5.1□□□□□ -1.59
CDH13P55290 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH13P55290 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 MUC2-202ENST00000613187 4845 ntBASIC5.1□□□□□ -1.59
CDH13P55290 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH13P55290 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH13P55290 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH13P55290 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CDH13P55290 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 ZNF90P1-201ENST00000480493 1951 ntBASIC5.09□□□□□ -1.59
CDH13P55290 Z95331.1-201ENST00000623075 23112 ntBASIC5.09□□□□□ -1.59
CDH13P55290 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH13P55290 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 ZNF733P-202ENST00000444809 1573 ntBASIC5.09□□□□□ -1.59
CDH13P55290 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 TCP1P3-201ENST00000414406 1498 ntBASIC5.09□□□□□ -1.59
CDH13P55290 NXF4-202ENST00000416098 1465 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AL359715.4-201ENST00000606629 1436 ntBASIC5.09□□□□□ -1.59
CDH13P55290 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 TMSB4XP4-201ENST00000323496 618 ntBASIC5.09□□□□□ -1.59
CDH13P55290 RNU1-146P-201ENST00000364015 165 ntBASIC5.09□□□□□ -1.59
CDH13P55290 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.09□□□□□ -1.59
CDH13P55290 RNU1-77P-201ENST00000390868 162 ntBASIC5.09□□□□□ -1.59
CDH13P55290 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 ARL2BPP3-201ENST00000421226 480 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 NAP1L4P2-201ENST00000425958 899 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 KCTD9P1-201ENST00000430462 1167 ntBASIC5.09□□□□□ -1.59
CDH13P55290 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH13P55290 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH13P55290 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH13P55290 AC108729.2-201ENST00000476543 840 ntBASIC5.09□□□□□ -1.59
CDH13P55290 RN7SL273P-201ENST00000481561 299 ntBASIC5.09□□□□□ -1.59
CDH13P55290 RPL7P40-201ENST00000481703 745 ntBASIC5.09□□□□□ -1.59
CDH13P55290 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 AC106806.2-201ENST00000509365 500 ntBASIC5.09□□□□□ -1.59
CDH13P55290 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 AC006427.1-201ENST00000514359 712 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 OR4R2P-201ENST00000530815 597 ntBASIC5.09□□□□□ -1.59
CDH13P55290 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDH13P55290 AP002373.2-201ENST00000541631 1060 ntBASIC5.09□□□□□ -1.59
CDH13P55290 CR383656.14-201ENST00000551951 406 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH13P55290 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 NDUFA5P11-201ENST00000567995 343 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms