Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RAD23BP1-201ENST00000421404 1227 ntBASIC6.84□□□□□ -1.31
MSH6P52701 AC006946.1-201ENST00000429106 328 ntBASIC6.84□□□□□ -1.31
MSH6P52701 MTND2P40-201ENST00000436718 841 ntBASIC6.84□□□□□ -1.31
MSH6P52701 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 IGBP1P4-201ENST00000503202 879 ntBASIC6.84□□□□□ -1.31
MSH6P52701 AC106806.2-201ENST00000509365 500 ntBASIC6.84□□□□□ -1.31
MSH6P52701 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.84□□□□□ -1.31
MSH6P52701 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.84□□□□□ -1.31
MSH6P52701 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.84□□□□□ -1.31
MSH6P52701 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.84□□□□□ -1.31
MSH6P52701 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.84□□□□□ -1.31
MSH6P52701 AC008782.1-201ENST00000603386 430 ntBASIC6.84□□□□□ -1.31
MSH6P52701 AC019206.1-201ENST00000621938 425 ntBASIC6.84□□□□□ -1.31
MSH6P52701 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
MSH6P52701 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
MSH6P52701 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
MSH6P52701 AC140134.1-201ENST00000511830 3544 ntBASIC6.84□□□□□ -1.32
MSH6P52701 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.83□□□□□ -1.32
MSH6P52701 SNORA70C-201ENST00000384538 135 ntBASIC6.83□□□□□ -1.32
MSH6P52701 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MSH6P52701 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.83□□□□□ -1.32
MSH6P52701 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 AC090018.1-201ENST00000434369 367 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AL162591.2-201ENST00000449634 317 ntBASIC6.83□□□□□ -1.32
MSH6P52701 CYCSP34-201ENST00000458172 304 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AC023424.1-201ENST00000496058 459 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.83□□□□□ -1.32
MSH6P52701 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.83□□□□□ -1.32
MSH6P52701 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
MSH6P52701 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.83□□□□□ -1.32
MSH6P52701 AC023043.4-201ENST00000612081 449 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AC007786.3-201ENST00000615154 596 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AL031658.2-201ENST00000616850 651 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AP001153.1-201ENST00000641024 338 ntBASIC6.83□□□□□ -1.32
MSH6P52701 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.83□□□□□ -1.32
MSH6P52701 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 ECM1P2-201ENST00000503354 1577 ntBASIC6.83□□□□□ -1.32
MSH6P52701 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
MSH6P52701 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 SMG1P7-201ENST00000565246 2704 ntBASIC6.83□□□□□ -1.32
MSH6P52701 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
MSH6P52701 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MSH6P52701 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
MSH6P52701 AP000432.2-201ENST00000624164 2048 ntBASIC6.83□□□□□ -1.32
MSH6P52701 AC092681.1-201ENST00000297369 291 ntBASIC6.82□□□□□ -1.32
MSH6P52701 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 AC023271.1-201ENST00000445936 1090 ntBASIC6.82□□□□□ -1.32
MSH6P52701 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.82□□□□□ -1.32
MSH6P52701 MIR2116-201ENST00000517221 80 ntBASIC6.82□□□□□ -1.32
MSH6P52701 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.82□□□□□ -1.32
MSH6P52701 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.82□□□□□ -1.32
MSH6P52701 AC019322.1-201ENST00000571869 389 ntBASIC6.82□□□□□ -1.32
MSH6P52701 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 AC007497.1-201ENST00000610421 561 ntBASIC6.82□□□□□ -1.32
MSH6P52701 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MSH6P52701 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.82□□□□□ -1.32
MSH6P52701 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 DNM1P47-203ENST00000571780 12667 ntBASIC6.82□□□□□ -1.32
MSH6P52701 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 AC018628.1-201ENST00000624147 3819 ntBASIC6.82□□□□□ -1.32
MSH6P52701 AL137058.3-201ENST00000624531 3099 ntBASIC6.82□□□□□ -1.32
MSH6P52701 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MSH6P52701 OR4K17-201ENST00000315543 1032 ntBASIC6.82□□□□□ -1.32
MSH6P52701 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MSH6P52701 ST13P16-201ENST00000401760 781 ntBASIC6.82□□□□□ -1.32
MSH6P52701 RPL36AP36-201ENST00000418616 301 ntBASIC6.82□□□□□ -1.32
MSH6P52701 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 AC009963.4-201ENST00000448535 339 ntBASIC6.82□□□□□ -1.32
MSH6P52701 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MSH6P52701 AC111000.6-201ENST00000514471 709 ntBASIC6.82□□□□□ -1.32
MSH6P52701 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.82□□□□□ -1.32
MSH6P52701 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.82□□□□□ -1.32
MSH6P52701 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.82□□□□□ -1.32
MSH6P52701 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
MSH6P52701 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.81□□□□□ -1.32
MSH6P52701 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MSH6P52701 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms