Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL12P48061 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 RNU4-25P-201ENST00000410569 230 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL12P48061 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL12P48061 AL354868.1-201ENST00000417077 482 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.93□□□□□ -1.62
CXCL12P48061 RPL12P34-201ENST00000424532 479 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AL732292.1-201ENST00000426692 226 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 UBE2V2P4-201ENST00000447495 259 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL12P48061 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL12P48061 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.93□□□□□ -1.62
CXCL12P48061 HMGB1P4-201ENST00000455362 567 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 RN7SL41P-201ENST00000476144 297 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 OR11I1P-201ENST00000486033 954 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL12P48061 SLC25A15P5-201ENST00000508033 253 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 RNA5SP464-201ENST00000516251 108 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL12P48061 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.93□□□□□ -1.62
CXCL12P48061 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL12P48061 AC016839.1-201ENST00000578162 867 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL12P48061 AC087821.1-201ENST00000623639 567 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 AC005618.4-201ENST00000625053 554 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL12P48061 AC004076.2-201ENST00000620532 3323 ntBASIC4.93□□□□□ -1.62
CXCL12P48061 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 AC068446.1-201ENST00000556425 1549 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 SAMM50P1-201ENST00000455403 1399 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 HYALP1-201ENST00000417674 1279 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 RPS27AP6-201ENST00000427962 448 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL12P48061 AL162591.2-201ENST00000449634 317 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CXCL12P48061 SNRPCP3-201ENST00000474888 476 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 RN7SL441P-201ENST00000492388 296 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 SCARNA22-201ENST00000503991 125 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AC093824.1-201ENST00000508796 343 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AC111000.6-201ENST00000514471 709 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 RN7SKP67-201ENST00000515905 235 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL12P48061 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL12P48061 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 AP005119.2-201ENST00000579735 1105 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL12P48061 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 AL356608.1-201ENST00000610034 820 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 MIR6716-201ENST00000613413 80 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL12P48061 MIR6839-201ENST00000620425 113 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AC002044.3-201ENST00000623314 541 ntBASIC4.92□□□□□ -1.62
CXCL12P48061 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL12P48061 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CXCL12P48061 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL12P48061 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL12P48061 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL12P48061 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 AP001284.1-201ENST00000528393 2118 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL12P48061 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL12P48061 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL12P48061 RNA5SP388-201ENST00000362584 119 ntBASIC4.91□□□□□ -1.62
CXCL12P48061 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms