Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RORAP35398 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.91□□□□□ -1.62
RORAP35398 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 AP001642.1-201ENST00000624727 2117 ntBASIC4.91□□□□□ -1.62
RORAP35398 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.91□□□□□ -1.62
RORAP35398 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 RNU1-74P-201ENST00000384108 171 ntBASIC4.91□□□□□ -1.62
RORAP35398 MIR585-201ENST00000384887 94 ntBASIC4.91□□□□□ -1.62
RORAP35398 RNA5SP241-201ENST00000391326 114 ntBASIC4.91□□□□□ -1.62
RORAP35398 HMGB3P7-201ENST00000400214 611 ntBASIC4.91□□□□□ -1.62
RORAP35398 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.91□□□□□ -1.62
RORAP35398 NOP56P2-201ENST00000447491 769 ntBASIC4.91□□□□□ -1.62
RORAP35398 AC090804.1-201ENST00000448870 490 ntBASIC4.91□□□□□ -1.62
RORAP35398 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 AP002371.1-201ENST00000463604 433 ntBASIC4.91□□□□□ -1.62
RORAP35398 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.91□□□□□ -1.62
RORAP35398 RPL37AP8-201ENST00000494116 276 ntBASIC4.91□□□□□ -1.62
RORAP35398 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.91□□□□□ -1.62
RORAP35398 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.91□□□□□ -1.62
RORAP35398 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.91□□□□□ -1.62
RORAP35398 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.91□□□□□ -1.62
RORAP35398 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.91□□□□□ -1.62
RORAP35398 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.91□□□□□ -1.62
RORAP35398 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.91□□□□□ -1.62
RORAP35398 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 AC006210.2-201ENST00000367074 1545 ntBASIC4.91□□□□□ -1.62
RORAP35398 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.91□□□□□ -1.62
RORAP35398 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RORAP35398 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.91□□□□□ -1.62
RORAP35398 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RORAP35398 MIPEPP2-201ENST00000422560 1819 ntBASIC4.9□□□□□ -1.62
RORAP35398 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RORAP35398 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.62
RORAP35398 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.9□□□□□ -1.62
RORAP35398 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.9□□□□□ -1.62
RORAP35398 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RORAP35398 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RORAP35398 NXF4-202ENST00000416098 1465 ntBASIC4.9□□□□□ -1.62
RORAP35398 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.9□□□□□ -1.62
RORAP35398 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
RORAP35398 BMS1P3-201ENST00000372011 932 ntBASIC4.9□□□□□ -1.63
RORAP35398 OR1L6-202ENST00000373684 1044 ntBASIC4.9□□□□□ -1.63
RORAP35398 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.9□□□□□ -1.63
RORAP35398 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.9□□□□□ -1.63
RORAP35398 HSPD1P12-201ENST00000429127 1069 ntBASIC4.9□□□□□ -1.63
RORAP35398 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.9□□□□□ -1.63
RORAP35398 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.9□□□□□ -1.63
RORAP35398 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.9□□□□□ -1.63
RORAP35398 NDUFA5P8-201ENST00000449019 346 ntBASIC4.9□□□□□ -1.63
RORAP35398 RNA5SP103-201ENST00000459503 118 ntBASIC4.9□□□□□ -1.63
RORAP35398 RPL7P41-201ENST00000485823 957 ntBASIC4.9□□□□□ -1.63
RORAP35398 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.9□□□□□ -1.63
RORAP35398 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.9□□□□□ -1.63
RORAP35398 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.9□□□□□ -1.63
RORAP35398 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.9□□□□□ -1.63
RORAP35398 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.9□□□□□ -1.63
RORAP35398 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.9□□□□□ -1.63
RORAP35398 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.9□□□□□ -1.63
RORAP35398 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.9□□□□□ -1.63
RORAP35398 AL627230.1-201ENST00000613077 211 ntBASIC4.9□□□□□ -1.63
RORAP35398 AL591926.8-201ENST00000616876 211 ntBASIC4.9□□□□□ -1.63
RORAP35398 AP001784.1-201ENST00000624107 428 ntBASIC4.9□□□□□ -1.63
RORAP35398 AL353662.3-201ENST00000625131 237 ntBASIC4.9□□□□□ -1.63
RORAP35398 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 INTS6P1-201ENST00000504674 2530 ntBASIC4.9□□□□□ -1.63
RORAP35398 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.9□□□□□ -1.63
RORAP35398 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
RORAP35398 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.9□□□□□ -1.63
RORAP35398 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
RORAP35398 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
RORAP35398 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.89□□□□□ -1.63
RORAP35398 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms