Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC073465.2-201ENST00000440938 498 ntBASIC5.19□□□□□ -1.58
CDH3P22223 RPS15AP29-201ENST00000445539 400 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH3P22223 GAPDHP25-201ENST00000447061 1001 ntBASIC5.19□□□□□ -1.58
CDH3P22223 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH3P22223 MTND6P32-201ENST00000457611 483 ntBASIC5.19□□□□□ -1.58
CDH3P22223 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH3P22223 AC006499.3-201ENST00000506077 748 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH3P22223 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH3P22223 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDH3P22223 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH3P22223 RNU6-941P-201ENST00000516346 108 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC027308.1-201ENST00000517993 110 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH3P22223 AC125612.1-201ENST00000547580 377 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH3P22223 RPL10P14-201ENST00000565265 298 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH3P22223 AC007448.1-201ENST00000582714 234 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH3P22223 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH3P22223 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AL135786.2-201ENST00000608422 615 ntBASIC5.19□□□□□ -1.58
CDH3P22223 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH3P22223 AL162233.1-201ENST00000620014 944 ntBASIC5.19□□□□□ -1.58
CDH3P22223 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH3P22223 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH3P22223 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH3P22223 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH3P22223 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH3P22223 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH3P22223 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 HSPA8P17-201ENST00000427029 1382 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AC079097.1-201ENST00000512187 1399 ntBASIC5.18□□□□□ -1.58
CDH3P22223 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH3P22223 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH3P22223 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 RN7SKP224-201ENST00000364140 325 ntBASIC5.18□□□□□ -1.58
CDH3P22223 RNU1-74P-201ENST00000384108 171 ntBASIC5.18□□□□□ -1.58
CDH3P22223 MIR105-1-201ENST00000385222 81 ntBASIC5.18□□□□□ -1.58
CDH3P22223 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 TRIM60P17-201ENST00000415181 719 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AC108075.1-201ENST00000424692 529 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AL139148.1-201ENST00000427122 680 ntBASIC5.18□□□□□ -1.58
CDH3P22223 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 ZFAND6P1-201ENST00000434138 605 ntBASIC5.18□□□□□ -1.58
CDH3P22223 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 FAR2P1-206ENST00000449736 709 ntBASIC5.18□□□□□ -1.58
CDH3P22223 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 AC245028.2-201ENST00000458673 253 ntBASIC5.18□□□□□ -1.58
CDH3P22223 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 AL049829.1-201ENST00000465411 156 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AC079841.1-201ENST00000481228 950 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AC072052.1-201ENST00000496556 306 ntBASIC5.18□□□□□ -1.58
CDH3P22223 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 SEC11B-201ENST00000518383 499 ntBASIC5.18□□□□□ -1.58
CDH3P22223 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 OR7E10P-201ENST00000526420 991 ntBASIC5.18□□□□□ -1.58
CDH3P22223 HAUS8P1-201ENST00000549005 542 ntBASIC5.18□□□□□ -1.58
CDH3P22223 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 SULT1C2P2-201ENST00000562517 294 ntBASIC5.18□□□□□ -1.58
CDH3P22223 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH3P22223 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH3P22223 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.18□□□□□ -1.58
CDH3P22223 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH3P22223 CYP4F35P-202ENST00000636121 390 ntBASIC5.18□□□□□ -1.58
CDH3P22223 AC119674.1-220ENST00000641502 1048 ntBASIC5.18□□□□□ -1.58
CDH3P22223 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 AC011493.1-201ENST00000596753 1632 ntBASIC5.18□□□□□ -1.58
CDH3P22223 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH3P22223 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH3P22223 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 UBBP2-201ENST00000376781 231 ntBASIC5.17□□□□□ -1.58
CDH3P22223 RNU6-883P-201ENST00000384597 107 ntBASIC5.17□□□□□ -1.58
CDH3P22223 MIR105-2-201ENST00000385083 81 ntBASIC5.17□□□□□ -1.58
CDH3P22223 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH3P22223 OR1F12-201ENST00000402365 945 ntBASIC5.17□□□□□ -1.58
CDH3P22223 RPL5P19-201ENST00000404228 893 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AL589655.1-201ENST00000405398 482 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH3P22223 MTND2P11-201ENST00000423638 648 ntBASIC5.17□□□□□ -1.58
CDH3P22223 MTCO1P51-201ENST00000427672 1060 ntBASIC5.17□□□□□ -1.58
CDH3P22223 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 MRPS33P4-201ENST00000434892 317 ntBASIC5.17□□□□□ -1.58
CDH3P22223 OR52B5P-201ENST00000435337 951 ntBASIC5.17□□□□□ -1.58
CDH3P22223 CNOT7P2-201ENST00000441051 832 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms