Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATF4P18848 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATF4P18848 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATF4P18848 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.97□□□□□ -1.45
ATF4P18848 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATF4P18848 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
ATF4P18848 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ATF4P18848 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ATF4P18848 EEF1A1P3-201ENST00000417549 1385 ntBASIC5.96□□□□□ -1.45
ATF4P18848 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATF4P18848 RNU1-21P-201ENST00000363327 163 ntBASIC5.96□□□□□ -1.46
ATF4P18848 RNU6-289P-201ENST00000364093 107 ntBASIC5.96□□□□□ -1.46
ATF4P18848 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 AL450124.1-201ENST00000376401 353 ntBASIC5.96□□□□□ -1.46
ATF4P18848 SNORA70H-201ENST00000383910 135 ntBASIC5.96□□□□□ -1.46
ATF4P18848 SNORA70J-201ENST00000384182 135 ntBASIC5.96□□□□□ -1.46
ATF4P18848 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.96□□□□□ -1.46
ATF4P18848 SSXP10-201ENST00000402595 565 ntBASIC5.96□□□□□ -1.46
ATF4P18848 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.96□□□□□ -1.46
ATF4P18848 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 COX6CP17-201ENST00000421389 185 ntBASIC5.96□□□□□ -1.46
ATF4P18848 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 AC109583.1-201ENST00000432156 268 ntBASIC5.96□□□□□ -1.46
ATF4P18848 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATF4P18848 MTND5P14-201ENST00000441481 1267 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AL591438.2-201ENST00000452635 691 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC002553.2-201ENST00000453217 340 ntBASIC5.96□□□□□ -1.46
ATF4P18848 OR6K1P-201ENST00000456766 971 ntBASIC5.96□□□□□ -1.46
ATF4P18848 KLF3P2-201ENST00000465138 268 ntBASIC5.96□□□□□ -1.46
ATF4P18848 RPSAP48-201ENST00000466509 889 ntBASIC5.96□□□□□ -1.46
ATF4P18848 RN7SL740P-201ENST00000467060 344 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC010683.1-201ENST00000473673 378 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC090453.1-201ENST00000495560 436 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC109927.2-201ENST00000506416 303 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 RN7SKP242-201ENST00000515967 289 ntBASIC5.96□□□□□ -1.46
ATF4P18848 IGHVIII-82-201ENST00000522058 250 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC5.96□□□□□ -1.46
ATF4P18848 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 AC063949.1-201ENST00000552900 865 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC5.96□□□□□ -1.46
ATF4P18848 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 UBE2CP4-201ENST00000561405 535 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 AC009063.1-201ENST00000563342 702 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.96□□□□□ -1.46
ATF4P18848 RN7SL473P-201ENST00000580341 299 ntBASIC5.96□□□□□ -1.46
ATF4P18848 MIR4307-201ENST00000582802 84 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC015818.6-201ENST00000584274 634 ntBASIC5.96□□□□□ -1.46
ATF4P18848 APOC2-204ENST00000591597 447 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 AC093063.1-201ENST00000599317 363 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC067773.1-201ENST00000603284 1094 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC104117.5-201ENST00000606195 547 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC013476.2-201ENST00000614456 459 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AC025588.4-201ENST00000615802 908 ntBASIC5.96□□□□□ -1.46
ATF4P18848 AP001005.3-201ENST00000622049 129 ntBASIC5.96□□□□□ -1.46
ATF4P18848 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 SEPT14P19-203ENST00000633205 211 ntBASIC5.96□□□□□ -1.46
ATF4P18848 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 AL136531.3-201ENST00000624378 3658 ntBASIC5.96□□□□□ -1.46
ATF4P18848 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ATF4P18848 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.96□□□□□ -1.46
ATF4P18848 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATF4P18848 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.96□□□□□ -1.46
ATF4P18848 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.95□□□□□ -1.46
ATF4P18848 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.95□□□□□ -1.46
ATF4P18848 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.95□□□□□ -1.46
ATF4P18848 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.95□□□□□ -1.46
ATF4P18848 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
ATF4P18848 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATF4P18848 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATF4P18848 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC5.95□□□□□ -1.46
ATF4P18848 ISY1-202ENST00000393292 988 ntTSL 5 BASIC5.95□□□□□ -1.46
ATF4P18848 AC016769.3-201ENST00000396562 315 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms